C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103496-ENSG00000167394 CGP 9606 16:31032889-31074320
GeneTranscriptPositionBiotype
ENSG00000103496 (STX4)
syntaxin 4 		ENST00000313843 (STX4-001) 31033491-31040168 protein_coding
ENST00000394998 (STX4-003) 31033095-31040163 protein_coding
ENST00000457779 (STX4-005) 31032889-31035032 protein_coding
ENST00000460668 (STX4-009) 31033547-31038187 nonsense_mediated_decay
ENST00000461455 (STX4-007) 31033588-31034877 retained_intron
ENST00000468583 (STX4-012) 31038619-31040168 retained_intron
ENST00000475862 (STX4-011) 31038601-31040168 retained_intron
ENST00000478150 (STX4-008) 31033786-31034507 retained_intron
ENST00000486660 (STX4-010) 31038510-31040012 retained_intron
ENST00000487411 (STX4-004) 31033546-31039803 retained_intron
ENST00000493902 (STX4-002) 31033095-31040129 processed_transcript
ENST00000496977 (STX4-006) 31033547-31038647 nonsense_mediated_decay
ENST00000503629 (STX4-016) 31039080-31042975 processed_transcript
ENST00000564368 (STX4-017) 31039320-31040147 processed_transcript
ENST00000565483 (STX4-014) 31033606-31034853 retained_intron
ENST00000566353 (STX4-013) 31033557-31034518 retained_intron
ENST00000613541 (STX4-018) 31033805-31034877 protein_coding
ENSG00000167394 (ZNF668)
zinc finger protein 668 		ENST00000300849 (ZNF668-001) 31060850-31074320 protein_coding
ENST00000394983 (ZNF668-002) 31060850-31073502 protein_coding
ENST00000414399 (ZNF668-006) 31062122-31073712 protein_coding
ENST00000417935 (ZNF668-005) 31064184-31072827 protein_coding
ENST00000426488 (ZNF668-004) 31060848-31064969 protein_coding
ENST00000442862 (ZNF668-003) 31063969-31065088 protein_coding
ENST00000535577 (ZNF668-201) 31060843-31065088 protein_coding
ENST00000538906 (ZNF668-202) 31060848-31073502 protein_coding
ENST00000539836 (ZNF668-008) 31060851-31065055 protein_coding
ENST00000564456 (ZNF668-007) 31064650-31074184 processed_transcript
ENSG00000232748 (RP11-196G11.6)
 ENST00000417110 (RP11-196G11.6-201) 31059477-31062763 lincRNA
ENST00000622229 (RP11-196G11.6-001) 31056460-31062803 lincRNA
ENSG00000260911 (RP11-196G11.2)
 ENST00000570266 (RP11-196G11.2-001) 31043150-31049868 lincRNA
ENSG00000261124 (AC135050.5)
 ENST00000568708 (AC135050.5-001) 31065495-31069246 antisense
CIL_0001UH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030805-ENSMUSG00000049728 CGP 10090 7:127824294-127876828
GeneTranscriptPositionBiotype
ENSMUSG00000030805 (Stx4a)
syntaxin 4A (placental) 		ENSMUST00000033075 (Stx4a-001) 127841764-127849019 protein_coding
ENSMUST00000121705 (Stx4a-002) 127841968-127849019 protein_coding
ENSMUST00000123180 (Stx4a-007) 127845784-127848498 retained_intron
ENSMUST00000125861 (Stx4a-009) 127848391-127849019 retained_intron
ENSMUST00000138294 (Stx4a-006) 127842685-127846586 retained_intron
ENSMUST00000138399 (Stx4a-005) 127841970-127843944 retained_intron
ENSMUST00000142849 (Stx4a-008) 127843598-127848677 retained_intron
ENSMUST00000152310 (Stx4a-003) 127824294-127849019 processed_transcript
ENSMUST00000156537 (Stx4a-004) 127841978-127846618 nonsense_mediated_decay
ENSMUSG00000030806 (Stx1b)
syntaxin 1B 		ENSMUST00000106267 (Stx1b-001) 127803900-127824549 protein_coding
ENSMUST00000156135 (Stx1b-002) 127807372-127810924 retained_intron
ENSMUSG00000049728 (Zfp668)
zinc finger protein 668 		ENSMUST00000054415 (Zfp668-001) 127865170-127876828 protein_coding
ENSMUST00000106261 (Zfp668-004) 127865993-127875646 protein_coding
ENSMUST00000106262 (Zfp668-003) 127865993-127876777 protein_coding
ENSMUST00000106263 (Zfp668-002) 127865717-127876780 protein_coding
ENSMUST00000144721 (Zfp668-006) 127868041-127875657 protein_coding
ENSMUST00000150961 (Zfp668-005) 127873770-127876134 processed_transcript
ENSMUSG00000049739 (Zfp646)
zinc finger protein 646 		ENSMUST00000050383 (Zfp646-001) 127877701-127885996 protein_coding
ENSMUST00000131000 (Zfp646-002) 127876796-127880188 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UH_0001ENSG00000103496ENST00000313843ENST00000394998ENST00000457779ENST00000460668ENST00000461455ENST00000468583ENST00000475862ENST00000478150ENST00000486660ENST00000487411ENST00000493902ENST00000496977ENST00000503629ENST00000564368ENST00000565483ENST00000566353ENST00000613541ENSG00000167394ENST00000300849ENST00000394983ENST00000414399ENST00000417935ENST00000426488ENST00000442862ENST00000535577ENST00000538906ENST00000539836ENST00000564456ENSG00000232748ENST00000417110ENST00000622229ENSG00000260911ENST00000570266ENSG00000261124ENST00000568708CIL_0001UH_0002ENSMUSG00000030805ENSMUST00000033075ENSMUST00000121705ENSMUST00000123180ENSMUST00000125861ENSMUST00000138294ENSMUST00000138399ENSMUST00000142849ENSMUST00000152310ENSMUST00000156537ENSMUSG00000030806ENSMUST00000106267ENSMUST00000156135ENSMUSG00000049728ENSMUST00000054415ENSMUST00000106261ENSMUST00000106262ENSMUST00000106263ENSMUST00000144721ENSMUST00000150961ENSMUSG00000049739ENSMUST00000050383ENSMUST00000131000
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UH_0001ENSG00000103496ENST00000313843ENST00000394998ENST00000457779ENST00000460668ENST00000468583ENST00000475862ENST00000486660ENST00000487411ENST00000496977ENST00000503629ENST00000613541ENSG00000167394ENST00000300849ENST00000394983ENST00000426488ENST00000442862ENST00000535577ENST00000538906ENST00000564456ENSG00000232748ENST00000417110ENST00000622229ENSG00000260911ENST00000570266ENSG00000261124ENST00000568708CIL_0001UH_0002ENSMUSG00000030805ENSMUST00000033075ENSMUST00000121705ENSMUST00000125861ENSMUST00000142849ENSMUST00000156537ENSMUSG00000030806ENSMUST00000106267ENSMUST00000156135ENSMUSG00000049728ENSMUST00000054415ENSMUST00000106261ENSMUSG00000049739ENSMUST00000050383
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103496 ENST00000313843 36.832±0.00 35.534±0.00 1.244±0.00 17.412±0.00 12.012±11.14 20.875±19.41 7.433±6.76 26.588±0.00 7.509±5.09 21.505±19.23 17.988±0.00 19.478±13.69 29.363±5.75 15.236±10.60
ENST00000394998 N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A N/A N/A
ENST00000457779 N/A N/A N/A N/A N/A N/A 0.472±0.00 N/A N/A N/A N/A 1.833±0.00 N/A N/A
ENST00000460668 N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000461455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468583 N/A N/A 1.164±0.00 N/A 2.814±0.00 N/A N/A N/A N/A N/A 2.084±0.00 N/A N/A N/A
ENST00000475862 N/A N/A N/A 3.569±0.00 2.404±0.00 N/A N/A N/A N/A N/A 1.096±0.00 N/A N/A N/A
ENST00000478150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 73.411±0.00 63.446±0.00 32.588±0.00
ENST00000487411 8.295±0.00 14.594±0.00 N/A N/A 10.706±0.00 N/A N/A N/A N/A 6.281±5.36 2.007±0.00 12.845±3.40 N/A 3.910±0.00
ENST00000493902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.122±0.00
ENST00000503629 N/A N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613541 N/A N/A N/A N/A N/A N/A N/A 1.733±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000167394 ENST00000300849 1.484±0.00 2.315±0.00 N/A 2.767±2.04 1.648±0.00 0.988±0.00 1.402±0.00 1.584±0.00 0.812±0.00 0.593±0.34 0.558±0.00 1.259±0.57 1.400±0.09 1.705±0.63
ENST00000394983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.177±0.00 4.779±0.00
ENST00000414399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426488 0.672±0.00 4.110±0.00 0.265±0.00 N/A 0.967±0.75 N/A N/A 1.081±0.78 0.791±0.75 1.182±0.00 0.968±0.58 3.331±1.85 1.704±0.65 4.896±0.00
ENST00000442862 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A
ENST00000535577 N/A N/A N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A N/A N/A 3.290±1.29 N/A
ENST00000538906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.881±0.00 0.852±0.00 1.439±0.00
ENST00000539836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564456 N/A N/A 0.485±0.00 N/A N/A 0.129±0.00 0.930±0.00 N/A N/A 0.784±0.00 N/A 1.232±0.00 N/A N/A
ENSG00000232748 ENST00000417110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.341±0.00 N/A N/A N/A
ENST00000622229 0.838±0.00 1.945±0.00 N/A 0.853±0.75 1.168±0.00 0.643±0.00 0.788±0.00 0.735±0.00 0.385±0.00 0.659±0.00 0.354±0.00 0.394±0.00 N/A 0.927±0.00
ENSG00000260911 ENST00000570266 0.161±0.00 0.465±0.00 0.423±0.00 0.513±0.42 0.168±0.00 0.361±0.00 0.193±0.00 0.569±0.00 0.092±0.00 0.676±0.00 N/A 0.663±0.40 0.223±0.17 0.435±0.04
ENSG00000261124 ENST00000568708 0.065±0.00 0.267±0.00 N/A 0.220±0.00 0.034±0.00 0.063±0.00 0.030±0.00 0.100±0.00 0.169±0.00 0.154±0.02 0.228±0.00 0.108±0.06 0.124±0.00 0.196±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030805 ENSMUST00000033075 23.300±1.66 12.029±3.30 33.891±3.94 N/A 18.995±0.35 17.467±4.57 22.622±1.60 16.589±2.25 14.273±3.24 20.607±1.38 23.222±2.91 14.614±3.78 26.331±4.51 4.025±1.50
ENSMUST00000121705 13.841±1.06 13.313±2.69 18.431±3.98 N/A 12.666±0.80 10.992±1.87 9.284±2.59 5.956±1.48 7.742±1.92 12.964±1.04 8.947±1.31 15.494±3.59 18.429±7.10 2.814±0.45
ENSMUST00000123180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125861 N/A 20.856±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142849 N/A N/A 27.638±7.39 N/A N/A N/A N/A N/A N/A N/A N/A 33.720±12.38 46.247±13.21 7.873±0.00
ENSMUST00000152310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.010±0.00 N/A 3.538±0.00
ENSMUSG00000030806 ENSMUST00000106267 6.589±3.76 4.428±1.55 1.922±0.00 64.868±45.21 6.603±2.63 2.268±0.43 1.256±0.19 1.081±0.08 2.300±1.02 1.419±0.00 N/A 2.959±1.28 2.823±1.29 0.697±0.35
ENSMUST00000156135 N/A N/A N/A 549.561±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049728 ENSMUST00000054415 N/A N/A N/A 4.452±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106261 N/A N/A N/A 6.645±1.73 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049739 ENSMUST00000050383 N/A 6.479±2.29 5.350±0.20 5.784±2.75 9.591±3.52 4.449±0.51 1.814±0.00 5.841±0.93 5.190±0.90 5.153±0.34 1.276±0.44 7.617±1.71 5.171±0.87 12.799±9.71
ENSMUST00000131000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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