C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2 pseudogene 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458332 RPS2P46-001 ENSG00000189343 9606 - 17:19445970-19446852 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000458332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000458332 0.194±0.00 8.603±0.00 0.806±0.00 0.210±0.11 0.899±0.64 0.565±0.51 0.106±0.00 0.323±0.26 0.441±0.36 0.352±0.06 5.491±4.78 0.927±1.19 0.320±0.19 0.197±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 706
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 706
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 425
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0 233
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 5e-35 152
ENSMUST00000117457 Gm11540-001 unprocessed_pseudogene Mus_musculus 3e-33 147

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