C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458402 RPS4XP2-001 ENSG00000226948 9606 - 20:4629427-4630219 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000458402
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000458402 0.134±0.00 0.387±0.00 0.170±0.01 0.230±0.00 0.163±0.00 0.122±0.00 0.192±0.00 0.080±0.00 0.059±0.00 0.144±0.00 0.067±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 961
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 918
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 876
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 876
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000187360 RP24-279G1.1-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 483
ENSMUST00000152739 Rps4x-002 retained_intron Mus_musculus 0 207
ENSMUST00000118165 Gm14020-001 processed_pseudogene Mus_musculus 1e-35 154

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