C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type V, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460264 COL5A1-002 ENSG00000130635 9606 + 9:134822922-134830353 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000460264
Transcript ID Placenta
ENST00000460264 226.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000152 CIL_000152_0001 CGP 9:134317098-134844843
CIL_0001EU CIL_0001EU_0001 CGP 9:134641774-134887520

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028280 Col5a1-001 protein_coding Mus_musculus 0 654
ENSMUST00000145423 Col5a1-002 protein_coding Mus_musculus 0 544
ENSDART00000139598 col5a1-001 protein_coding Danio_rerio 0 351

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