C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A2/B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463181 HNRNPA2B1-003 ENSG00000122566 9606 - 7:26190304-26200784 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000463181
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000463181 7.626±0.00 2.680±0.00 11.353±0.00 9.243±0.00 2.440±0.00 6.505±0.00 8.320±0.00 16.830±0.00 1.769±0.00 10.965±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q3 CIL_0008Q3_0001 VISTA 7:25714231-26318034
CIL_000874 CIL_000874_0001 VISTA 7:25760923-26361842
CIL_0002CP CIL_0002CP_0001 CGP 7:26152240-26201529
CIL_0009DE CIL_0009DE_0001 VISTA 7:26185042-26786016
CIL_0002CO CIL_0002CO_0001 CGP 7:26189927-26213356

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114459 Hnrnpa2b1-203 protein_coding Mus_musculus 0 2268
ENSMUST00000090002 Hnrnpa2b1-202 protein_coding Mus_musculus 0 1561
ENSMUST00000171003 Gm5778-001 processed_pseudogene Mus_musculus 0 1247
ENSMUST00000069949 Hnrnpa2b1-201 protein_coding Mus_musculus 0 1055

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