C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000050344-ENSG00000122566 CGP 9606 7:26152240-26201529
GeneTranscriptPositionBiotype
ENSG00000050344 (NFE2L3)
nuclear factor, erythroid 2-like 3 		ENST00000056233 (NFE2L3-001) 26152240-26187125 protein_coding
ENST00000606261 (NFE2L3-002) 26184060-26186317 retained_intron
ENST00000607375 (NFE2L3-003) 26178003-26183874 protein_coding
ENSG00000122566 (HNRNPA2B1)
heterogeneous nuclear ribonucleoprotein A2/B1 		ENST00000354667 (HNRNPA2B1-001) 26189927-26200746 protein_coding
ENST00000356674 (HNRNPA2B1-002) 26191844-26200746 protein_coding
ENST00000360787 (HNRNPA2B1-006) 26190125-26200746 nonsense_mediated_decay
ENST00000463181 (HNRNPA2B1-003) 26190304-26200784 retained_intron
ENST00000476233 (HNRNPA2B1-007) 26189927-26191678 processed_transcript
ENST00000490912 (HNRNPA2B1-004) 26191849-26201529 retained_intron
ENST00000495810 (HNRNPA2B1-008) 26195712-26196907 retained_intron
ENST00000618183 (HNRNPA2B1-201) 26189936-26200793 protein_coding
ENSG00000273237 (CTB-119C2.1)
 ENST00000608362 (CTB-119C2.1-001) 26173533-26174945 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002CP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029832-ENSMUSG00000004980 CGP 10090 6:51432670-51469894
GeneTranscriptPositionBiotype
ENSMUSG00000004980 (Hnrnpa2b1)
heterogeneous nuclear ribonucleoprotein A2/B1 		ENSMUST00000069949 (Hnrnpa2b1-201) 51460932-51469894 protein_coding
ENSMUST00000090002 (Hnrnpa2b1-202) 51461124-51469845 protein_coding
ENSMUST00000114459 (Hnrnpa2b1-203) 51460434-51469894 protein_coding
ENSMUSG00000029832 (Nfe2l3)
nuclear factor, erythroid derived 2, like 3 		ENSMUST00000005103 (Nfe2l3-001) 51432670-51458768 protein_coding
ENSMUST00000061507 (Nfe2l3-003) 51432749-51436928 processed_transcript
ENSMUST00000160133 (Nfe2l3-002) 51432749-51456876 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CP_0001ENSG00000050344ENST00000056233ENST00000606261ENST00000607375ENSG00000122566ENST00000354667ENST00000356674ENST00000360787ENST00000463181ENST00000476233ENST00000490912ENST00000495810ENST00000618183ENSG00000273237ENST00000608362CIL_0002CP_0002ENSMUSG00000004980ENSMUST00000069949ENSMUST00000090002ENSMUST00000114459ENSMUSG00000029832ENSMUST00000005103ENSMUST00000061507ENSMUST00000160133
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CP_0001ENSG00000050344ENST00000056233ENST00000606261ENST00000607375ENSG00000122566ENST00000354667ENST00000356674ENST00000360787ENST00000463181ENST00000618183ENSG00000273237ENST00000608362CIL_0002CP_0002ENSMUSG00000004980ENSMUST00000069949ENSMUST00000090002ENSMUST00000114459ENSMUSG00000029832ENSMUST00000005103ENSMUST00000061507ENSMUST00000160133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000050344 ENST00000056233 1.649±0.00 1.852±0.00 N/A 0.231±0.14 1.990±1.12 0.475±0.00 0.661±0.00 1.590±0.00 0.167±0.00 2.541±0.55 0.290±0.00 8.851±9.35 36.761±25.65 1.056±0.07
ENST00000606261 1.269±0.00 2.857±0.00 N/A 0.358±0.05 2.130±1.31 1.064±0.00 0.610±0.00 0.995±0.71 0.512±0.00 4.382±0.00 0.161±0.00 9.230±11.15 34.809±27.42 0.813±0.44
ENST00000607375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.546±0.00 N/A N/A N/A
ENSG00000122566 ENST00000354667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.401±0.00 N/A N/A
ENST00000356674 152.434±0.00 422.626±0.00 10.578±0.00 116.997±106.47 88.911±75.65 140.785±122.48 112.167±106.07 193.129±176.33 69.375±62.09 263.744±0.00 82.937±66.91 348.427±240.40 298.777±139.63 556.989±60.65
ENST00000360787 28.841±0.00 N/A N/A N/A 37.372±0.00 N/A N/A N/A N/A N/A 31.143±0.00 N/A N/A N/A
ENST00000463181 N/A N/A 7.626±0.00 2.680±0.00 11.353±0.00 9.243±0.00 2.440±0.00 6.505±0.00 8.320±0.00 16.830±0.00 1.769±0.00 10.965±0.00 N/A N/A
ENST00000476233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618183 N/A N/A N/A N/A 5.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273237 ENST00000608362 N/A 0.819±0.00 N/A 0.202±0.00 0.137±0.00 0.547±0.52 1.791±1.00 0.563±0.00 0.149±0.03 0.207±0.10 0.611±0.48 0.752±0.52 0.219±0.14 0.183±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004980 ENSMUST00000069949 12.993±1.48 83.870±12.39 N/A N/A 24.290±7.82 27.778±5.32 N/A 14.527±2.60 8.474±0.85 19.910±3.61 N/A 25.095±10.83 58.339±2.23 47.191±31.77
ENSMUST00000090002 17.570±6.80 20.272±0.47 86.911±4.04 177.058±19.15 11.286±1.86 9.628±0.00 33.044±0.93 23.179±8.59 141.134±115.66 14.788±4.32 60.258±21.03 140.828±177.00 205.440±105.57 59.780±66.84
ENSMUST00000114459 28.431±10.23 16.990±2.62 61.337±20.70 72.910±61.83 25.531±3.26 17.765±2.43 18.148±1.67 21.716±3.36 81.213±72.66 30.273±3.55 18.182±11.18 36.120±26.03 44.901±23.25 16.187±5.08
ENSMUSG00000029832 ENSMUST00000005103 1.494±1.00 0.117±0.06 19.620±3.95 2.703±1.13 1.251±0.57 0.855±0.28 0.133±0.06 0.430±0.16 0.180±0.15 1.323±0.36 0.086±0.03 0.643±0.31 0.791±0.64 0.524±0.18
ENSMUST00000061507 N/A 0.174±0.06 N/A N/A N/A 0.420±0.12 0.090±0.00 0.219±0.00 0.208±0.00 N/A N/A 0.422±0.22 N/A N/A
ENSMUST00000160133 0.038±0.00 0.060±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A 0.211±0.00

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