C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122566-ENSG00000122565 CGP 9606 7:26189927-26213356
GeneTranscriptPositionBiotype
ENSG00000122566 (HNRNPA2B1)
heterogeneous nuclear ribonucleoprotein A2/B1 		ENST00000354667 (HNRNPA2B1-001) 26189927-26200746 protein_coding
ENST00000356674 (HNRNPA2B1-002) 26191844-26200746 protein_coding
ENST00000360787 (HNRNPA2B1-006) 26190125-26200746 nonsense_mediated_decay
ENST00000463181 (HNRNPA2B1-003) 26190304-26200784 retained_intron
ENST00000476233 (HNRNPA2B1-007) 26189927-26191678 processed_transcript
ENST00000490912 (HNRNPA2B1-004) 26191849-26201529 retained_intron
ENST00000495810 (HNRNPA2B1-008) 26195712-26196907 retained_intron
ENST00000618183 (HNRNPA2B1-201) 26189936-26200793 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002CO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004980-ENSMUSG00000029836 CGP 10090 6:51460434-51483704
GeneTranscriptPositionBiotype
ENSMUSG00000004980 (Hnrnpa2b1)
heterogeneous nuclear ribonucleoprotein A2/B1 		ENSMUST00000069949 (Hnrnpa2b1-201) 51460932-51469894 protein_coding
ENSMUST00000090002 (Hnrnpa2b1-202) 51461124-51469845 protein_coding
ENSMUST00000114459 (Hnrnpa2b1-203) 51460434-51469894 protein_coding
ENSMUSG00000029836 (Cbx3)
chromobox 3 		ENSMUST00000031862 (Cbx3-002) 51470530-51483704 protein_coding
ENSMUST00000094623 (Cbx3-001) 51470360-51483033 protein_coding
ENSMUST00000114445 (Cbx3-004) 51470666-51483704 protein_coding
ENSMUST00000114446 (Cbx3-005) 51470695-51483704 protein_coding
ENSMUST00000141711 (Cbx3-007) 51470746-51478600 protein_coding
ENSMUST00000153699 (Cbx3-006) 51470677-51472060 retained_intron
ENSMUST00000156463 (Cbx3-003) 51470663-51475241 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CO_0001ENSG00000122566ENST00000354667ENST00000356674ENST00000360787ENST00000463181ENST00000476233ENST00000490912ENST00000495810ENST00000618183CIL_0002CO_0002ENSMUSG00000004980ENSMUST00000069949ENSMUST00000090002ENSMUST00000114459ENSMUSG00000029836ENSMUST00000031862ENSMUST00000094623ENSMUST00000114445ENSMUST00000114446ENSMUST00000141711ENSMUST00000153699ENSMUST00000156463
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CO_0001ENSG00000122566ENST00000354667ENST00000356674ENST00000360787ENST00000463181ENST00000618183CIL_0002CO_0002ENSMUSG00000004980ENSMUST00000069949ENSMUST00000090002ENSMUST00000114459ENSMUSG00000029836ENSMUST00000031862ENSMUST00000094623ENSMUST00000114445ENSMUST00000114446ENSMUST00000156463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122566 ENST00000354667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.401±0.00 N/A N/A
ENST00000356674 152.434±0.00 422.626±0.00 10.578±0.00 116.997±106.47 88.911±75.65 140.785±122.48 112.167±106.07 193.129±176.33 69.375±62.09 263.744±0.00 82.937±66.91 348.427±240.40 298.777±139.63 556.989±60.65
ENST00000360787 28.841±0.00 N/A N/A N/A 37.372±0.00 N/A N/A N/A N/A N/A 31.143±0.00 N/A N/A N/A
ENST00000463181 N/A N/A 7.626±0.00 2.680±0.00 11.353±0.00 9.243±0.00 2.440±0.00 6.505±0.00 8.320±0.00 16.830±0.00 1.769±0.00 10.965±0.00 N/A N/A
ENST00000476233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618183 N/A N/A N/A N/A 5.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004980 ENSMUST00000069949 12.993±1.48 83.870±12.39 N/A N/A 24.290±7.82 27.778±5.32 N/A 14.527±2.60 8.474±0.85 19.910±3.61 N/A 25.095±10.83 58.339±2.23 47.191±31.77
ENSMUST00000090002 17.570±6.80 20.272±0.47 86.911±4.04 177.058±19.15 11.286±1.86 9.628±0.00 33.044±0.93 23.179±8.59 141.134±115.66 14.788±4.32 60.258±21.03 140.828±177.00 205.440±105.57 59.780±66.84
ENSMUST00000114459 28.431±10.23 16.990±2.62 61.337±20.70 72.910±61.83 25.531±3.26 17.765±2.43 18.148±1.67 21.716±3.36 81.213±72.66 30.273±3.55 18.182±11.18 36.120±26.03 44.901±23.25 16.187±5.08
ENSMUSG00000029836 ENSMUST00000031862 3.030±1.67 5.454±0.29 33.612±0.00 28.064±10.31 2.722±1.08 3.265±0.66 1.367±0.48 3.345±1.47 17.193±19.08 3.729±1.27 15.614±0.54 7.990±9.05 44.701±24.39 9.898±0.00
ENSMUST00000094623 3.246±0.00 N/A N/A N/A N/A 2.789±0.00 N/A N/A N/A N/A N/A 5.284±0.00 N/A N/A
ENSMUST00000114445 0.736±0.00 N/A N/A N/A N/A N/A 0.893±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114446 4.535±1.09 N/A N/A 23.045±11.42 3.596±1.63 3.140±0.00 4.949±1.14 4.842±2.43 10.490±8.22 6.903±2.01 N/A 23.791±13.66 22.585±12.89 N/A
ENSMUST00000141711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156463 1.493±0.71 5.342±1.02 N/A N/A 2.171±1.36 2.322±0.71 N/A 1.391±0.38 0.539±0.18 2.774±0.76 N/A 4.570±0.79 N/A N/A

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