C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463278 CTC-398G3.2-001 ENSG00000213303 9606 + 19:11523436-11523831 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000463278
Transcript ID Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000463278 0.405±0.00 0.606±0.00 0.035±0.00 0.186±0.00 0.118±0.08 0.314±0.00 0.137±0.00 0.413±0.00 0.143±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000764 CIL_000764_0001 CGP 19:11483427-11529174
CIL_000767 CIL_000767_0001 CGP 19:11505916-11550323

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 514
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 514
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000121980 Rps12-ps1-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000117751 Rps12-ps26-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000118668 Gm12677-001 processed_pseudogene Mus_musculus 0.000000003 66

Loading