C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease P/MRP 40kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464646 RPP40-006 ENSG00000124787 9606 - 6:4995078-5003658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLungOvaryPlacentaTestisENST00000464646
Transcript ID Bladder Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000464646 0.986±0.00 0.738±0.08 0.053±0.00 0.305±0.00 0.267±0.00 0.853±0.28 0.405±0.11 0.817±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000162 CIL_000162_0002 CGP 6:4706159-5004063
CIL_0003SE CIL_0003SE_0001 CGP 6:4994732-5089487

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171686 Rpp40-001 protein_coding Mus_musculus 0 965
ENSMUST00000174230 Rpp40-002 protein_coding Mus_musculus 0 721
ENSMUST00000174852 Rpp40-003 retained_intron Mus_musculus 0 614
ENSMUST00000174231 Rpp40-004 protein_coding Mus_musculus 0 202

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