C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cyclin L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464679 CCNL1-019 ENSG00000163660 9606 - 3:157149444-157152210 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000464679
Transcript ID Ovary Placenta Testis
ENST00000464679 52.495±0.00 21.167±0.00 31.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028X CIL_00028X_0001 CGP 3:156825481-157160760
CIL_00081H CIL_00081H_0001 VISTA 3:156827989-157431369
CIL_00028W CIL_00028W_0001 CGP 3:157146508-157533619

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135719 Ccnl1-003 nonsense_mediated_decay Mus_musculus 0 739
ENSMUST00000029416 Ccnl1-001 protein_coding Mus_musculus 0 739
ENSMUST00000129002 Ccnl1-002 nonsense_mediated_decay Mus_musculus 0 739
ENSMUST00000142153 Ccnl1-005 retained_intron Mus_musculus 0 684
ENSMUST00000154585 Ccnl1-007 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000144810 Ccnl1-009 nonsense_mediated_decay Mus_musculus 0 597
ENSMUST00000122919 Ccnl1-004 retained_intron Mus_musculus 0 505
ENSMUST00000150304 Ccnl1-013 retained_intron Mus_musculus 0 342
ENSMUST00000149729 Ccnl1-014 retained_intron Mus_musculus 8.99998e-41 171

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