C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142153 Ccnl1-005 ENSMUSG00000027829 10090 - 3:65946509-65958163 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142153
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142153 4.976±0.73 6.102±1.16 4.216±0.00 4.586±1.27 1.568±0.68 2.203±0.22 4.006±2.00 7.401±0.72 1.404±0.09 7.928±3.62 5.059±1.64 1.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081H CIL_00081H_0002 VISTA 3:65626895-66230134
CIL_00028X CIL_00028X_0002 CGP 3:65666228-65958249
CIL_00028W CIL_00028W_0002 CGP 3:65946151-66296837

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295925 CCNL1-201 protein_coding Homo_sapiens 0 625
ENST00000295926 CCNL1-001 protein_coding Homo_sapiens 0 1358
ENST00000461804 CCNL1-002 protein_coding Homo_sapiens 0 948
ENST00000464316 CCNL1-006 retained_intron Homo_sapiens 0 1358
ENST00000464575 CCNL1-015 retained_intron Homo_sapiens 0 392
ENST00000464679 CCNL1-019 retained_intron Homo_sapiens 0 684
ENST00000465947 CCNL1-012 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000466101 CCNL1-011 retained_intron Homo_sapiens 0 444
ENST00000467081 CCNL1-014 retained_intron Homo_sapiens 0 449
ENST00000467849 CCNL1-022 retained_intron Homo_sapiens 0 285
ENST00000468977 CCNL1-020 nonsense_mediated_decay Homo_sapiens 0 686
ENST00000470121 CCNL1-005 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000471044 CCNL1-010 retained_intron Homo_sapiens 0 627
ENST00000471247 CCNL1-008 retained_intron Homo_sapiens 0 1059
ENST00000474539 CCNL1-007 retained_intron Homo_sapiens 0 1461
ENST00000475298 CCNL1-003 nonsense_mediated_decay Homo_sapiens 0 1356
ENST00000476367 CCNL1-004 retained_intron Homo_sapiens 0 789
ENST00000476744 CCNL1-021 retained_intron Homo_sapiens 0 854
ENST00000477127 CCNL1-009 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000478454 CCNL1-016 retained_intron Homo_sapiens 0 499
ENST00000479052 CCNL1-017 processed_transcript Homo_sapiens 0 327
ENST00000479596 CCNL1-013 retained_intron Homo_sapiens 0 625
ENST00000481173 CCNL1-024 retained_intron Homo_sapiens 0 407
ENST00000483789 CCNL1-018 retained_intron Homo_sapiens 0 451
ENST00000495471 CCNL1-023 retained_intron Homo_sapiens 0 272

Loading