C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: profilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468323 PFN2-012 ENSG00000070087 9606 - 3:149965713-149970898 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000468323
Transcript ID Ovary Testis
ENST00000468323 18.397±0.00 15.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R7 CIL_0002R7_0001 CGP 3:149738470-149968385
CIL_0002R6 CIL_0002R6_0001 CGP 3:149761105-149968385
CIL_0002R5 CIL_0002R5_0001 CGP 3:149812708-150050788
CIL_0002QZ CIL_0002QZ_0001 CGP 3:149964904-150466431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0030036 IEA actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066882 Pfn2-001 protein_coding Mus_musculus 0 438
ENSMUST00000119344 Pfn2-002 protein_coding Mus_musculus 0 361
ENSMUST00000120289 Pfn2-003 protein_coding Mus_musculus 0 357
ENSMUST00000122210 Pfn2-004 protein_coding Mus_musculus 0 270

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