C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: early B-cell factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469215 EBF4-005 ENSG00000088881 9606 + 20:2693689-2749420 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLungOvaryENST00000469215
Transcript ID Bladder Brain Lung Ovary
ENST00000469215 0.474±0.00 0.504±0.00 1.320±0.00 0.368±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0001 VISTA 20:2438562-3039143
CIL_0000FY CIL_0000FY_0001 CGP 20:2658395-2760108
CIL_0000FX CIL_0000FX_0001 CGP 20:2692878-2800637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110287 Ebf4-006 protein_coding Mus_musculus 0 651
ENSMUST00000140169 Ebf4-005 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000126740 Ebf4-004 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000134728 Ebf4-003 retained_intron Mus_musculus 0 651
ENSMUST00000110286 Ebf4-001 protein_coding Mus_musculus 0 651
ENSMUST00000110288 Ebf4-002 protein_coding Mus_musculus 0 651

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