C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000FX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088881-ENSG00000088882 CGP 9606 20:2692878-2800637
GeneTranscriptPositionBiotype
ENSG00000088881 (EBF4)
early B-cell factor 4
ENST00000342725 (EBF4-009) 2692879-2760101 protein_coding
ENST00000380648 (EBF4-201) 2692878-2760107 protein_coding
ENST00000449079 (EBF4-002) 2692878-2760101 nonsense_mediated_decay
ENST00000463145 (EBF4-006) 2706241-2760077 protein_coding
ENST00000469215 (EBF4-005) 2693689-2749420 processed_transcript
ENST00000477287 (EBF4-003) 2755088-2760101 processed_transcript
ENST00000481662 (EBF4-008) 2752496-2760108 processed_transcript
ENST00000491472 (EBF4-007) 2751691-2755662 processed_transcript
ENST00000497450 (EBF4-004) 2692879-2706237 processed_transcript
ENST00000609451 (EBF4-011) 2693574-2759393 protein_coding
ENST00000609967 (EBF4-010) 2693574-2760071 retained_intron
ENSG00000088882 (CPXM1)
carboxypeptidase X (M14 family), member 1
ENST00000380605 (CPXM1-001) 2794069-2800637 protein_coding
ENSG00000226217 (RPL19P1)
ribosomal protein L19 pseudogene 1
ENST00000411635 (RPL19P1-001) 2780614-2781041 processed_pseudogene
CIL_0000FX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053552-ENSMUSG00000027408 CGP 10090 2:130295169-130397574
GeneTranscriptPositionBiotype
ENSMUSG00000027408 (Cpxm1)
carboxypeptidase X 1 (M14 family)
ENSMUST00000028897 (Cpxm1-001) 130390775-130397574 protein_coding
ENSMUST00000130533 (Cpxm1-002) 130390776-130393276 retained_intron
ENSMUSG00000053552 (Ebf4)
early B cell factor 4
ENSMUST00000110286 (Ebf4-001) 130295939-130370481 protein_coding
ENSMUST00000110287 (Ebf4-006) 130295939-130370481 protein_coding
ENSMUST00000110288 (Ebf4-002) 130295169-130370481 protein_coding
ENSMUST00000126740 (Ebf4-004) 130295939-130370481 nonsense_mediated_decay
ENSMUST00000134728 (Ebf4-003) 130295939-130370481 retained_intron
ENSMUST00000140169 (Ebf4-005) 130295939-130370481 nonsense_mediated_decay
ENSMUSG00000083483 (Gm14044)
predicted gene 14044
ENSMUST00000117531 (Gm14044-001) 130384883-130385329 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FX_0001ENSG00000088881ENST00000342725ENST00000380648ENST00000449079ENST00000463145ENST00000469215ENST00000477287ENST00000481662ENST00000491472ENST00000497450ENST00000609451ENST00000609967ENSG00000088882ENST00000380605ENSG00000226217ENST00000411635CIL_0000FX_0002ENSMUSG00000027408ENSMUST00000028897ENSMUST00000130533ENSMUSG00000053552ENSMUST00000110286ENSMUST00000110287ENSMUST00000110288ENSMUST00000126740ENSMUST00000134728ENSMUST00000140169ENSMUSG00000083483ENSMUST00000117531
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FX_0001ENSG00000088881ENST00000342725ENST00000380648ENST00000449079ENST00000463145ENST00000469215ENST00000477287ENST00000481662ENST00000497450ENST00000609451ENST00000609967ENSG00000088882ENST00000380605ENSG00000226217ENST00000411635CIL_0000FX_0002ENSMUSG00000027408ENSMUST00000028897ENSMUST00000130533ENSMUSG00000053552ENSMUST00000110286ENSMUST00000110287ENSMUST00000110288ENSMUST00000126740ENSMUST00000134728ENSMUST00000140169ENSMUSG00000083483ENSMUST00000117531
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088881 ENST00000342725 3.547±0.00 N/A N/A 0.106±0.00 1.110±0.82 4.242±0.00 N/A N/A 0.321±0.00 3.974±0.00 N/A 20.613±12.03 2.940±0.50 1.699±1.09
ENST00000380648 N/A N/A N/A N/A N/A 1.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449079 0.967±0.00 3.424±0.00 N/A 4.591±0.00 0.898±0.00 3.502±0.00 0.437±0.00 3.316±0.00 N/A 2.428±0.00 0.476±0.00 N/A 0.657±0.00 1.510±0.00
ENST00000463145 N/A N/A N/A N/A N/A N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000469215 N/A N/A 0.474±0.00 0.504±0.00 N/A N/A N/A N/A N/A 1.320±0.00 N/A 0.368±0.00 N/A N/A
ENST00000477287 N/A 1.037±0.00 N/A N/A N/A 2.261±0.00 0.281±0.00 0.882±0.75 0.980±0.00 2.531±0.00 N/A 5.847±1.27 1.078±0.10 0.991±0.19
ENST00000481662 N/A N/A N/A 1.377±0.00 N/A N/A N/A 2.975±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497450 N/A N/A N/A 1.133±0.00 N/A N/A N/A N/A 1.350±0.00 N/A N/A N/A 4.203±0.00 N/A
ENST00000609451 1.924±0.00 N/A 0.525±0.00 0.184±0.00 N/A N/A 0.431±0.00 2.008±0.00 N/A N/A 0.147±0.00 3.727±4.87 0.934±0.00 1.445±0.00
ENST00000609967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A
ENSG00000088882 ENST00000380605 11.008±0.00 1.976±0.00 0.497±0.00 0.158±0.12 3.557±2.66 1.580±1.08 0.715±0.36 2.474±2.42 0.905±0.89 0.880±0.72 0.136±0.00 25.523±26.97 79.605±37.40 7.948±5.75
ENSG00000226217 ENST00000411635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027408 ENSMUST00000028897 19.407±3.91 5.679±0.78 39.221±2.40 4.742±1.95 27.190±8.91 1.135±0.23 2.674±0.73 6.505±0.38 0.981±0.36 9.020±1.52 1.358±0.34 34.669±7.61 19.440±14.93 2.649±1.31
ENSMUST00000130533 N/A N/A N/A 1.820±0.00 N/A N/A N/A N/A N/A N/A 1.079±0.34 12.692±2.74 2.725±0.00 32.256±7.06
ENSMUSG00000053552 ENSMUST00000110286 1.542±1.91 1.156±0.25 N/A N/A 0.303±0.00 0.415±0.15 N/A 0.350±0.03 0.069±0.03 0.421±0.21 N/A 4.724±2.36 0.350±0.04 0.388±0.09
ENSMUST00000110287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.11 3.585±0.47 1.202±0.89 0.108±0.00
ENSMUST00000110288 1.332±1.26 1.159±0.71 1.441±0.23 4.603±0.02 0.234±0.00 0.617±0.00 0.134±0.00 0.222±0.13 0.060±0.04 0.363±0.06 0.383±0.00 4.219±1.17 0.386±0.08 0.261±0.00
ENSMUST00000126740 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.020±0.00 N/A 0.227±0.10 N/A 0.540±0.00 N/A
ENSMUST00000134728 N/A 1.307±0.06 0.970±0.00 3.147±0.35 N/A 0.320±0.13 N/A N/A 0.072±0.06 0.408±0.08 N/A 3.397±0.79 0.144±0.00 N/A
ENSMUST00000140169 1.148±1.01 0.889±0.22 0.462±0.00 2.012±0.88 0.185±0.00 N/A 0.210±0.05 0.153±0.03 0.075±0.05 0.285±0.01 0.138±0.07 3.134±0.61 N/A 0.358±0.19
ENSMUSG00000083483 ENSMUST00000117531 0.115±0.00 N/A 0.042±0.01 0.128±0.04 0.122±0.00 N/A N/A 0.116±0.00 0.071±0.04 0.123±0.00 N/A 0.265±0.08 0.355±0.45 N/A

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