C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early B cell factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134728 Ebf4-003 ENSMUSG00000053552 10090 + 2:130295939-130370481 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonLiverLungOvaryPlacentaENSMUST00000134728
Transcript ID Adrenal Bladder Brain Colon Liver Lung Ovary Placenta
ENSMUST00000134728 1.307±0.06 0.970±0.00 3.147±0.35 0.320±0.13 0.072±0.06 0.408±0.08 3.397±0.79 0.144±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_0000FY CIL_0000FY_0002 CGP 2:130279309-130370481
CIL_0000FX CIL_0000FX_0002 CGP 2:130295169-130397574

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100508 ebf1b-201 protein_coding Danio_rerio 0 505
ENSDART00000136729 ebf1b-001 protein_coding Danio_rerio 0 329
ENST00000342725 EBF4-009 protein_coding Homo_sapiens 0 1609
ENST00000380648 EBF4-201 protein_coding Homo_sapiens 0 1605
ENST00000449079 EBF4-002 nonsense_mediated_decay Homo_sapiens 0 1605
ENST00000463145 EBF4-006 protein_coding Homo_sapiens 0 494
ENST00000469215 EBF4-005 processed_transcript Homo_sapiens 0 651
ENST00000477287 EBF4-003 processed_transcript Homo_sapiens 0 298
ENST00000481662 EBF4-008 processed_transcript Homo_sapiens 2e-24 115
ENST00000491472 EBF4-007 processed_transcript Homo_sapiens 0 725
ENST00000497450 EBF4-004 processed_transcript Homo_sapiens 0 555
ENST00000609451 EBF4-011 protein_coding Homo_sapiens 0 1666
ENST00000609967 EBF4-010 retained_intron Homo_sapiens 0 2569

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