C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101365-ENSG00000088881 CGP 9606 20:2658395-2760108
GeneTranscriptPositionBiotype
ENSG00000088881 (EBF4)
early B-cell factor 4 		ENST00000342725 (EBF4-009) 2692879-2760101 protein_coding
ENST00000380648 (EBF4-201) 2692878-2760107 protein_coding
ENST00000449079 (EBF4-002) 2692878-2760101 nonsense_mediated_decay
ENST00000463145 (EBF4-006) 2706241-2760077 protein_coding
ENST00000469215 (EBF4-005) 2693689-2749420 processed_transcript
ENST00000477287 (EBF4-003) 2755088-2760101 processed_transcript
ENST00000481662 (EBF4-008) 2752496-2760108 processed_transcript
ENST00000491472 (EBF4-007) 2751691-2755662 processed_transcript
ENST00000497450 (EBF4-004) 2692879-2706237 processed_transcript
ENST00000609451 (EBF4-011) 2693574-2759393 protein_coding
ENST00000609967 (EBF4-010) 2693574-2760071 retained_intron
ENSG00000101365 (IDH3B)
isocitrate dehydrogenase 3 (NAD+) beta 		ENST00000380843 (IDH3B-011) 2658395-2664219 protein_coding
ENST00000380851 (IDH3B-010) 2658395-2664219 protein_coding
ENST00000462967 (IDH3B-008) 2660296-2664215 retained_intron
ENST00000466494 (IDH3B-004) 2658395-2660308 processed_transcript
ENST00000466999 (IDH3B-009) 2659283-2659916 processed_transcript
ENST00000474315 (IDH3B-001) 2658395-2664189 protein_coding
ENST00000477689 (IDH3B-003) 2658542-2660309 processed_transcript
ENST00000479376 (IDH3B-005) 2660032-2660553 processed_transcript
ENST00000488299 (IDH3B-012) 2658395-2664188 retained_intron
ENST00000491065 (IDH3B-002) 2660505-2664209 retained_intron
ENST00000492240 (IDH3B-007) 2658395-2660359 retained_intron
ENST00000613370 (IDH3B-201) 2659015-2664219 protein_coding
ENSG00000228293 (RP4-686C3.7)
 ENST00000418739 (RP4-686C3.7-001) 2664352-2665874 antisense
CIL_0000FY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027406-ENSMUSG00000053552 CGP 10090 2:130279309-130370481
GeneTranscriptPositionBiotype
ENSMUSG00000027406 (Idh3b)
isocitrate dehydrogenase 3 (NAD+) beta 		ENSMUST00000028892 (Idh3b-001) 130279309-130284547 protein_coding
ENSMUST00000124868 (Idh3b-003) 130283663-130284415 retained_intron
ENSMUST00000149843 (Idh3b-002) 130282145-130284434 retained_intron
ENSMUST00000184538 (Idh3b-004) 130279313-130280551 nonsense_mediated_decay
ENSMUSG00000053552 (Ebf4)
early B cell factor 4 		ENSMUST00000110286 (Ebf4-001) 130295939-130370481 protein_coding
ENSMUST00000110287 (Ebf4-006) 130295939-130370481 protein_coding
ENSMUST00000110288 (Ebf4-002) 130295169-130370481 protein_coding
ENSMUST00000126740 (Ebf4-004) 130295939-130370481 nonsense_mediated_decay
ENSMUST00000134728 (Ebf4-003) 130295939-130370481 retained_intron
ENSMUST00000140169 (Ebf4-005) 130295939-130370481 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FY_0001ENSG00000088881ENST00000342725ENST00000380648ENST00000449079ENST00000463145ENST00000469215ENST00000477287ENST00000481662ENST00000491472ENST00000497450ENST00000609451ENST00000609967ENSG00000101365ENST00000380843ENST00000380851ENST00000462967ENST00000466494ENST00000466999ENST00000474315ENST00000477689ENST00000479376ENST00000488299ENST00000491065ENST00000492240ENST00000613370ENSG00000228293ENST00000418739CIL_0000FY_0002ENSMUSG00000027406ENSMUST00000028892ENSMUST00000124868ENSMUST00000149843ENSMUST00000184538ENSMUSG00000053552ENSMUST00000110286ENSMUST00000110287ENSMUST00000110288ENSMUST00000126740ENSMUST00000134728ENSMUST00000140169
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FY_0001ENSG00000088881ENST00000342725ENST00000380648ENST00000449079ENST00000463145ENST00000469215ENST00000477287ENST00000481662ENST00000497450ENST00000609451ENST00000609967ENSG00000101365ENST00000380843ENST00000380851ENST00000462967ENST00000466494ENST00000474315ENST00000477689ENST00000491065ENST00000613370ENSG00000228293ENST00000418739CIL_0000FY_0002ENSMUSG00000027406ENSMUST00000028892ENSMUSG00000053552ENSMUST00000110286ENSMUST00000110287ENSMUST00000110288ENSMUST00000126740ENSMUST00000134728ENSMUST00000140169
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088881 ENST00000342725 3.547±0.00 N/A N/A 0.106±0.00 1.110±0.82 4.242±0.00 N/A N/A 0.321±0.00 3.974±0.00 N/A 20.613±12.03 2.940±0.50 1.699±1.09
ENST00000380648 N/A N/A N/A N/A N/A 1.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449079 0.967±0.00 3.424±0.00 N/A 4.591±0.00 0.898±0.00 3.502±0.00 0.437±0.00 3.316±0.00 N/A 2.428±0.00 0.476±0.00 N/A 0.657±0.00 1.510±0.00
ENST00000463145 N/A N/A N/A N/A N/A N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000469215 N/A N/A 0.474±0.00 0.504±0.00 N/A N/A N/A N/A N/A 1.320±0.00 N/A 0.368±0.00 N/A N/A
ENST00000477287 N/A 1.037±0.00 N/A N/A N/A 2.261±0.00 0.281±0.00 0.882±0.75 0.980±0.00 2.531±0.00 N/A 5.847±1.27 1.078±0.10 0.991±0.19
ENST00000481662 N/A N/A N/A 1.377±0.00 N/A N/A N/A 2.975±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497450 N/A N/A N/A 1.133±0.00 N/A N/A N/A N/A 1.350±0.00 N/A N/A N/A 4.203±0.00 N/A
ENST00000609451 1.924±0.00 N/A 0.525±0.00 0.184±0.00 N/A N/A 0.431±0.00 2.008±0.00 N/A N/A 0.147±0.00 3.727±4.87 0.934±0.00 1.445±0.00
ENST00000609967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A
ENSG00000101365 ENST00000380843 19.653±0.00 25.565±0.00 2.359±0.00 19.759±5.49 10.722±8.85 23.635±0.00 13.319±0.00 19.650±12.76 7.993±4.15 34.999±0.00 10.818±5.92 27.101±15.08 29.165±7.12 20.017±6.90
ENST00000380851 N/A N/A 1.190±0.00 N/A N/A 3.279±0.00 36.564±18.40 N/A N/A 1.421±0.00 8.861±0.00 N/A N/A N/A
ENST00000462967 N/A N/A N/A N/A N/A 4.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466494 N/A N/A N/A N/A 2.908±0.00 4.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474315 16.399±0.00 19.323±0.00 2.278±0.00 12.169±8.93 11.556±8.94 7.655±5.73 N/A 9.829±8.68 4.706±1.09 5.612±0.00 16.736±0.00 10.136±2.05 8.630±3.47 11.185±3.74
ENST00000477689 N/A N/A N/A N/A N/A N/A N/A N/A 6.976±0.00 N/A N/A N/A N/A N/A
ENST00000479376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491065 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.017±0.00 N/A N/A N/A N/A
ENST00000492240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613370 N/A N/A N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A 1.734±0.00 N/A N/A N/A
ENSG00000228293 ENST00000418739 0.061±0.00 0.045±0.00 N/A 0.253±0.00 0.015±0.00 0.042±0.00 N/A N/A 0.202±0.19 0.535±0.44 N/A 0.065±0.02 0.044±0.00 0.188±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027406 ENSMUST00000028892 168.002±25.58 139.810±44.69 109.120±21.23 93.303±14.06 160.176±63.02 109.528±19.48 200.227±112.49 243.122±12.44 128.657±19.80 62.510±8.55 179.941±14.72 89.900±17.99 79.963±21.22 65.809±14.20
ENSMUST00000124868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053552 ENSMUST00000110286 1.542±1.91 1.156±0.25 N/A N/A 0.303±0.00 0.415±0.15 N/A 0.350±0.03 0.069±0.03 0.421±0.21 N/A 4.724±2.36 0.350±0.04 0.388±0.09
ENSMUST00000110287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.11 3.585±0.47 1.202±0.89 0.108±0.00
ENSMUST00000110288 1.332±1.26 1.159±0.71 1.441±0.23 4.603±0.02 0.234±0.00 0.617±0.00 0.134±0.00 0.222±0.13 0.060±0.04 0.363±0.06 0.383±0.00 4.219±1.17 0.386±0.08 0.261±0.00
ENSMUST00000126740 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.020±0.00 N/A 0.227±0.10 N/A 0.540±0.00 N/A
ENSMUST00000134728 N/A 1.307±0.06 0.970±0.00 3.147±0.35 N/A 0.320±0.13 N/A N/A 0.072±0.06 0.408±0.08 N/A 3.397±0.79 0.144±0.00 N/A
ENSMUST00000140169 1.148±1.01 0.889±0.22 0.462±0.00 2.012±0.88 0.185±0.00 N/A 0.210±0.05 0.153±0.03 0.075±0.05 0.285±0.01 0.138±0.07 3.134±0.61 N/A 0.358±0.19

Loading