C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S18 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476880 RPS18P6-001 ENSG00000244048 9606 + 3:95171920-95172377 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverMuscleOvaryTestisENST00000476880
Transcript ID Colon Heart Liver Muscle Ovary Testis
ENST00000476880 0.027±0.00 0.026±0.00 0.025±0.00 0.127±0.00 0.052±0.00 0.936±0.73

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120838 Rps18-ps1-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000008812 Rps18-001 protein_coding Mus_musculus 0 339
ENSMUST00000074072 Gm10260-201 protein_coding Mus_musculus 0 339
ENSMUST00000174745 Rps18-011 processed_transcript Mus_musculus 0 335
ENSMUST00000077163 Gm11361-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000080443 Rps18-ps3-201 protein_coding Mus_musculus 0 331
ENSMUST00000174620 Rps18-012 retained_intron Mus_musculus 0 292
ENSMUST00000121730 Gm15696-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000174175 Rps18-005 retained_intron Mus_musculus 0 274
ENSMUST00000174609 Rps18-006 protein_coding Mus_musculus 0 274
ENSMUST00000172799 Rps18-002 processed_transcript Mus_musculus 0 228
ENSMUST00000174758 Rps18-008 retained_intron Mus_musculus 0 228

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