C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074072 Gm10260-201 ENSMUSG00000069117 10090 - 13:97760130-97760588 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074072
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074072 0.311±0.09 1.143±0.27 1.288±1.22 154.058±153.89 0.145±0.01 0.247±0.08 0.147±0.04 0.095±0.01 0.756±0.86 0.160±0.05 0.135±0.00 0.522±0.23 145.143±225.37 62.622±123.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017975 rps18-001 protein_coding Danio_rerio 0 326
ENSDART00000143134 rps18-003 protein_coding Danio_rerio 0 322
ENSDART00000142769 rps18-002 protein_coding Danio_rerio 0 320
ENSDART00000131839 rps18-005 protein_coding Danio_rerio 0 239
ENSDART00000134350 rps18-004 retained_intron Danio_rerio 0 237
ENST00000211372 RPS18-001 protein_coding Homo_sapiens 0 628
ENST00000404109 RP11-428J1.2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000412454 RPS18P12-001 processed_pseudogene Homo_sapiens 0 573
ENST00000434122 RPS18-001 protein_coding Homo_sapiens 0 628
ENST00000439602 RPS18-001 protein_coding Homo_sapiens 0 628
ENST00000440980 RPS18-001 protein_coding Homo_sapiens 9.00054e-42 172
ENST00000454021 RPS18-001 protein_coding Homo_sapiens 0 628
ENST00000457341 RPS18-001 protein_coding Homo_sapiens 0 628
ENST00000459882 RPS18-002 processed_transcript Homo_sapiens 0 625
ENST00000461584 RPS18-005 retained_intron Homo_sapiens 0 625
ENST00000463232 RPS18-005 retained_intron Homo_sapiens 0 625
ENST00000464447 RPS18-007 retained_intron Homo_sapiens 0 536
ENST00000464602 RPS18-004 retained_intron Homo_sapiens 0 272
ENST00000470276 RPS18-003 processed_transcript Homo_sapiens 0 462
ENST00000470852 RPS18-005 retained_intron Homo_sapiens 0 625
ENST00000472218 RPS18-004 retained_intron Homo_sapiens 0 272
ENST00000472979 RPS18-007 retained_intron Homo_sapiens 0 536
ENST00000473242 RPS18-006 retained_intron Homo_sapiens 0 436
ENST00000473705 RPS18-005 retained_intron Homo_sapiens 4.00001e-40 169
ENST00000474626 RPS18-006 retained_intron Homo_sapiens 0 436
ENST00000474973 RPS18-002 protein_coding Homo_sapiens 0 625
ENST00000475634 RPS18-005 retained_intron Homo_sapiens 0 625
ENST00000476222 RPS18-003 processed_transcript Homo_sapiens 0 462
ENST00000476288 RPS18-003 protein_coding Homo_sapiens 0 462
ENST00000476337 RPS18-002 processed_transcript Homo_sapiens 0 625
ENST00000476880 RPS18P6-001 processed_pseudogene Homo_sapiens 0 339
ENST00000477055 RPS18-002 protein_coding Homo_sapiens 0 625
ENST00000477273 RPS18-006 retained_intron Homo_sapiens 0 436
ENST00000477787 RPS18-007 retained_intron Homo_sapiens 0 536
ENST00000481330 RPS18-006 retained_intron Homo_sapiens 0 436
ENST00000482391 RPS18-007 retained_intron Homo_sapiens 0 536
ENST00000482698 RPS18-004 retained_intron Homo_sapiens 0 272
ENST00000482817 RPS18P9-001 processed_pseudogene Homo_sapiens 0 514
ENST00000484321 RPS18-003 protein_coding Homo_sapiens 0 462
ENST00000485674 RPS18-004 retained_intron Homo_sapiens 0 272
ENST00000486781 RPS18-002 protein_coding Homo_sapiens 0 625
ENST00000489474 RPS18-004 retained_intron Homo_sapiens 0 272
ENST00000490191 RPS18-005 retained_intron Homo_sapiens 0 625
ENST00000490380 RPS18-006 retained_intron Homo_sapiens 0 436
ENST00000494232 RPS18-003 protein_coding Homo_sapiens 0 462
ENST00000495909 CTD-2061E19.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000496294 RP11-234A1.1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000496813 RPS18-007 retained_intron Homo_sapiens 0 536
ENST00000497078 RPS18-002 processed_transcript Homo_sapiens 9.99995e-41 169

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