C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15696
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121730 Gm15696-001 ENSMUSG00000083853 10090 - 16:31970362-31970806 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121730 0.379±0.16 0.473±0.29 0.215±0.08 1.577±0.85 0.356±0.16 0.502±0.23 0.143±0.04 0.199±0.11 0.454±0.11 0.315±0.26 0.190±0.08 1.255±0.78 1.700±0.55 0.391±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017975 rps18-001 protein_coding Danio_rerio 0 211
ENSDART00000143134 rps18-003 protein_coding Danio_rerio 0 209
ENSDART00000142769 rps18-002 protein_coding Danio_rerio 0 207
ENSDART00000131839 rps18-005 protein_coding Danio_rerio 2.94273e-44 182
ENSDART00000134350 rps18-004 retained_intron Danio_rerio 9.94922e-44 180
ENST00000211372 RPS18-001 protein_coding Homo_sapiens 0 488
ENST00000434122 RPS18-001 protein_coding Homo_sapiens 0 488
ENST00000439602 RPS18-001 protein_coding Homo_sapiens 0 488
ENST00000454021 RPS18-001 protein_coding Homo_sapiens 0 488
ENST00000457341 RPS18-001 protein_coding Homo_sapiens 0 488
ENST00000459882 RPS18-002 processed_transcript Homo_sapiens 0 486
ENST00000461584 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000463232 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000464447 RPS18-007 retained_intron Homo_sapiens 0 442
ENST00000464602 RPS18-004 retained_intron Homo_sapiens 0 237
ENST00000470276 RPS18-003 processed_transcript Homo_sapiens 0 348
ENST00000470852 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000472218 RPS18-004 retained_intron Homo_sapiens 0 237
ENST00000472979 RPS18-007 retained_intron Homo_sapiens 0 442
ENST00000473242 RPS18-006 retained_intron Homo_sapiens 0 377
ENST00000474626 RPS18-006 retained_intron Homo_sapiens 0 377
ENST00000474973 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000475634 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000476222 RPS18-003 processed_transcript Homo_sapiens 0 348
ENST00000476288 RPS18-003 protein_coding Homo_sapiens 0 348
ENST00000476337 RPS18-002 processed_transcript Homo_sapiens 0 486
ENST00000476880 RPS18P6-001 processed_pseudogene Homo_sapiens 0 289
ENST00000477055 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000477273 RPS18-006 retained_intron Homo_sapiens 0 377
ENST00000477787 RPS18-007 retained_intron Homo_sapiens 0 442
ENST00000481330 RPS18-006 retained_intron Homo_sapiens 0 377
ENST00000482391 RPS18-007 retained_intron Homo_sapiens 0 442
ENST00000482698 RPS18-004 retained_intron Homo_sapiens 0 237
ENST00000482817 RPS18P9-001 processed_pseudogene Homo_sapiens 0 396
ENST00000484321 RPS18-003 protein_coding Homo_sapiens 0 348
ENST00000485674 RPS18-004 retained_intron Homo_sapiens 0 237
ENST00000486781 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000489474 RPS18-004 retained_intron Homo_sapiens 0 237
ENST00000490191 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000490380 RPS18-006 retained_intron Homo_sapiens 0 377
ENST00000494232 RPS18-003 protein_coding Homo_sapiens 0 348
ENST00000495909 CTD-2061E19.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000496294 RP11-234A1.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000496813 RPS18-007 retained_intron Homo_sapiens 0 442

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