C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477659 BCL11A-008 ENSG00000119866 9606 - 2:60459820-60536206 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaTestisENST00000477659
Transcript ID Liver Placenta Testis
ENST00000477659 0.170±0.00 0.024±0.00 0.301±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0001 UCNEbase 2:57740887-60568309
CIL_0008BH CIL_0008BH_0001 VISTA 2:59914360-60515380
CIL_000881 CIL_000881_0001 VISTA 2:59970922-60574878
CIL_0008WW CIL_0008WW_0001 VISTA 2:59988962-60590957
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109514 Bcl11a-006 protein_coding Mus_musculus 0 4076
ENSMUST00000000881 Bcl11a-003 protein_coding Mus_musculus 0 3020
ENSDART00000087426 bcl11aa-001 protein_coding Danio_rerio 0 508
ENSMUST00000127494 Bcl11a-002 processed_transcript Mus_musculus 0 429
ENSMUST00000109516 Bcl11a-005 protein_coding Mus_musculus 0 425
ENSMUST00000118955 Bcl11a-001 protein_coding Mus_musculus 0 425
ENSMUST00000109891 Bcl11b-003 protein_coding Mus_musculus 0 270
ENSMUST00000109887 Bcl11b-002 protein_coding Mus_musculus 0 270
ENSMUST00000066060 Bcl11b-001 protein_coding Mus_musculus 0 270
ENSDART00000097543 BCL11B (2 of 2)-201 protein_coding Danio_rerio 2e-29 135
ENSMUST00000131318 Zfp629-005 protein_coding Mus_musculus 0.000001 60
ENSMUST00000084564 Zfp629-001 protein_coding Mus_musculus 0.000001 60
ENSMUST00000122066 Zfp629-002 protein_coding Mus_musculus 0.000001 60
ENSMUST00000058038 Zfp629-003 protein_coding Mus_musculus 0.000001 60

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