C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477670 RPS4XP6-001 ENSG00000244073 9606 + 5:37085056-37085852 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477670 0.192±0.00 0.100±0.00 0.988±0.00 0.184±0.17 0.150±0.00 0.123±0.00 0.133±0.00 0.133±0.00 0.066±0.01 0.030±0.00 0.028±0.00 0.038±0.00 0.054±0.00 0.048±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 896
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 817
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 817
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000187360 RP24-279G1.1-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000119465 Gm12757-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 424
ENSMUST00000152739 Rps4x-002 retained_intron Mus_musculus 0 198

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