C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transformer 2 beta homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160579 Tra2b-002 ENSMUSG00000022858 10090 - 16:22258064-22265918 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000160579
Transcript ID Liver
ENSMUST00000160579 6.000±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0003YC CIL_0003YC_0003 CGP 16:22059009-22266005
CIL_0006RI CIL_0006RI_0002 CGP 16:22244549-22439719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342294 TRA2B-017 protein_coding Homo_sapiens 0 292
ENST00000382191 TRA2B-008 protein_coding Homo_sapiens 3e-23 113
ENST00000453386 TRA2B-001 protein_coding Homo_sapiens 3e-22 111
ENST00000456380 TRA2B-003 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000465245 TRA2B-010 processed_transcript Homo_sapiens 8e-22 108
ENST00000471134 TRA2B-012 processed_transcript Homo_sapiens 0 514
ENST00000477939 TRA2B-013 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000480461 TRA2B-009 retained_intron Homo_sapiens 0 734
ENST00000485530 TRA2B-011 retained_intron Homo_sapiens 4e-21 106
ENST00000487615 TRA2B-004 retained_intron Homo_sapiens 0 514

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