| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000162413 | 8.253±0.00 | 18.164±0.00 | 15.559±5.94 | 21.114±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transformer 2 beta homolog (Drosophila) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000162413  |
Tra2b-003 |
ENSMUSG00000022858 |
10090 | - |
16:22246462-22265829  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008ZT | CIL_0008ZT_0002 | VISTA | 16:21809929-22410861 |
| CIL_0003YC | CIL_0003YC_0003 | CGP | 16:22059009-22266005 |
| CIL_0006RI | CIL_0006RI_0002 | CGP | 16:22244549-22439719 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000381 | ISS | regulation of alternative mRNA splicing, via spliceosome |
| GO:0000398 | ISS | mRNA splicing, via spliceosome |
| GO:0003729 | ISS | mRNA binding |
| GO:0005634 | ISS | nucleus |
| GO:0048026 | ISS | positive regulation of mRNA splicing, via spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000259043
|
TRA2B-014 | protein_coding | Homo_sapiens | 0 | 737 |
|
ENST00000342294
|
TRA2B-017 | protein_coding | Homo_sapiens | 0 | 267 |
|
ENST00000382191
|
TRA2B-008 | protein_coding | Homo_sapiens | 0 | 935 |
|
ENST00000414862
|
TRA2B-016 | protein_coding | Homo_sapiens | 0 | 1014 |
|
ENST00000453386
|
TRA2B-001 | protein_coding | Homo_sapiens | 0 | 1749 |
|
ENST00000456380
|
TRA2B-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 2342 |
|
ENST00000463328
|
TRA2B-006 | retained_intron | Homo_sapiens | 0 | 1347 |
|
ENST00000465245
|
TRA2B-010 | processed_transcript | Homo_sapiens | 0 | 425 |
|
ENST00000466832
|
TRA2B-007 | retained_intron | Homo_sapiens | 0 | 1064 |
|
ENST00000471134
|
TRA2B-012 | processed_transcript | Homo_sapiens | 0 | 527 |
|
ENST00000477939
|
TRA2B-013 | retained_intron | Homo_sapiens | 0 | 484 |
|
ENST00000480461
|
TRA2B-009 | retained_intron | Homo_sapiens | 0 | 595 |
|
ENST00000485530
|
TRA2B-011 | retained_intron | Homo_sapiens | 0 | 407 |
|
ENST00000487615
|
TRA2B-004 | retained_intron | Homo_sapiens | 0 | 2261 |
|
ENST00000492417
|
TRA2B-005 | retained_intron | Homo_sapiens | 0 | 1751 |
|
ENST00000493864
|
TRA2B-015 | retained_intron | Homo_sapiens | 0 | 407 |
