C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481038 GPCPD1-002 ENSG00000125772 9606 - 20:5544439-5586037 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENST00000481038
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENST00000481038 0.503±0.00 1.544±0.00 0.894±0.00 3.123±0.00 0.499±0.25 1.018±0.49 2.550±0.00 0.629±0.00 5.608±3.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041F CIL_00041F_0001 CGP 20:5302040-5611026
CIL_00057F CIL_00057F_0001 CGP 20:5544439-5863912

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110142 Gpcpd1-201 protein_coding Mus_musculus 0 2769
ENSMUST00000060955 Gpcpd1-001 protein_coding Mus_musculus 0 2769
ENSMUST00000110136 Gpcpd1-004 protein_coding Mus_musculus 0 2769
ENSMUST00000149854 Gpcpd1-003 nonsense_mediated_decay Mus_musculus 0 2767
ENSMUST00000145694 Gpcpd1-002 nonsense_mediated_decay Mus_musculus 0 2547
ENSMUST00000148833 Gpcpd1-005 nonsense_mediated_decay Mus_musculus 0 2547
ENSMUST00000028822 Gpcpd1-006 protein_coding Mus_musculus 0 1881
ENSMUST00000127712 Gpcpd1-007 retained_intron Mus_musculus 0 1683
ENSMUST00000124632 Gpcpd1-012 nonsense_mediated_decay Mus_musculus 0 564

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