C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 50, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481619 FAM50A-007 ENSG00000071859 9606 + X:154444248-154449081 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMuscleOvaryPlacentaTestisENST00000481619
Transcript ID Bladder Brain Liver Lung Muscle Ovary Placenta Testis
ENST00000481619 0.883±0.00 0.523±0.00 1.849±0.00 0.567±0.00 0.943±0.00 5.933±5.71 8.846±0.00 2.765±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LB CIL_0003LB_0001 CGP X:154436920-154450654
CIL_0006K8 CIL_0006K8_0001 CGP X:154444126-154473646

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114160 Fam50a-001 protein_coding Mus_musculus 0 765
ENSMUST00000138242 Fam50a-002 retained_intron Mus_musculus 0 424
ENSMUST00000039605 Fam50b-201 protein_coding Mus_musculus 0 405
ENSMUST00000149312 Fam50a-003 retained_intron Mus_musculus 8e-38 161

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