C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006K8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071859-ENSG00000130827 CGP 9606 X:154444126-154473646
GeneTranscriptPositionBiotype
ENSG00000130827 (PLXNA3)
plexin A3 		ENST00000369682 (PLXNA3-001) 154458281-154473646 protein_coding
ENST00000467463 (PLXNA3-005) 154466419-154467175 processed_transcript
ENST00000478236 (PLXNA3-004) 154466091-154466765 retained_intron
ENST00000480645 (PLXNA3-006) 154468617-154468869 processed_transcript
ENST00000482598 (PLXNA3-009) 154464449-154464980 retained_intron
ENST00000491066 (PLXNA3-003) 154468661-154469350 retained_intron
ENST00000493546 (PLXNA3-007) 154469082-154470708 processed_transcript
ENST00000495040 (PLXNA3-008) 154458284-154461374 processed_transcript
ENST00000497802 (PLXNA3-002) 154470847-154472696 retained_intron
ENSG00000276350 (MIR6858)
microRNA 6858 		ENST00000620733 (MIR6858-201) 154450320-154450386 miRNA
CIL_0006K8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001962-ENSMUSG00000031398 CGP 10090 X:74313033-74344689
GeneTranscriptPositionBiotype
ENSMUSG00000001962 (Fam50a)
family with sequence similarity 50, member A 		ENSMUST00000114160 (Fam50a-001) 74313033-74320149 protein_coding
ENSMUST00000138242 (Fam50a-002) 74313126-74320134 retained_intron
ENSMUST00000149312 (Fam50a-003) 74317468-74317965 retained_intron
ENSMUSG00000031398 (Plxna3)
plexin A3 		ENSMUST00000004326 (Plxna3-001) 74329066-74344689 protein_coding
ENSMUST00000136114 (Plxna3-003) 74329066-74332243 processed_transcript
ENSMUST00000137484 (Plxna3-009) 74341587-74343945 retained_intron
ENSMUST00000139323 (Plxna3-006) 74335232-74336336 retained_intron
ENSMUST00000142236 (Plxna3-004) 74333746-74334703 retained_intron
ENSMUST00000148726 (Plxna3-008) 74338349-74339159 retained_intron
ENSMUST00000152317 (Plxna3-007) 74338266-74339316 retained_intron
ENSMUST00000152376 (Plxna3-005) 74334326-74335839 retained_intron
ENSMUST00000154062 (Plxna3-002) 74332457-74344683 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K8_0001ENSG00000130827ENST00000369682ENST00000467463ENST00000478236ENST00000480645ENST00000482598ENST00000491066ENST00000493546ENST00000495040ENST00000497802ENSG00000276350ENST00000620733CIL_0006K8_0002ENSMUSG00000001962ENSMUST00000114160ENSMUST00000138242ENSMUST00000149312ENSMUSG00000031398ENSMUST00000004326ENSMUST00000136114ENSMUST00000137484ENSMUST00000139323ENSMUST00000142236ENSMUST00000148726ENSMUST00000152317ENSMUST00000152376ENSMUST00000154062
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K8_0001ENSG00000130827ENST00000369682ENST00000491066ENST00000495040ENST00000497802ENSG00000276350ENST00000620733CIL_0006K8_0002ENSMUSG00000001962ENSMUST00000114160ENSMUST00000138242ENSMUSG00000031398ENSMUST00000004326ENSMUST00000137484ENSMUST00000148726ENSMUST00000152376ENSMUST00000154062
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130827 ENST00000369682 1.019±0.00 1.844±0.00 0.092±0.00 1.472±0.00 1.877±1.15 2.051±1.53 1.098±0.00 0.849±0.79 0.317±0.00 2.367±1.47 0.577±0.49 8.956±5.99 2.543±0.23 2.600±0.11
ENST00000467463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491066 N/A N/A N/A N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495040 N/A N/A N/A N/A N/A N/A 0.972±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497802 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A 1.079±0.00 2.541±1.43 N/A N/A
ENSG00000276350 ENST00000620733 N/A 3.458±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A N/A N/A N/A 0.641±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001962 ENSMUST00000114160 7.224±2.09 19.819±7.46 20.153±2.66 14.025±1.65 7.082±3.64 8.640±3.89 2.269±0.42 9.238±1.93 10.923±6.82 7.691±1.38 8.872±1.15 19.026±11.51 29.323±6.99 1.326±0.98
ENSMUST00000138242 1.052±0.00 N/A 1.926±0.00 1.535±0.45 1.150±0.17 N/A N/A 0.751±0.08 0.550±0.00 0.812±0.19 0.975±0.14 1.983±0.62 N/A 0.131±0.03
ENSMUST00000149312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031398 ENSMUST00000004326 4.081±2.64 3.625±0.94 1.965±0.05 28.748±19.26 4.310±1.08 2.534±0.42 0.233±0.17 0.720±0.36 0.604±0.46 1.789±0.14 0.103±0.07 8.945±3.05 0.606±0.43 0.206±0.06
ENSMUST00000136114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137484 N/A N/A N/A N/A N/A N/A 0.624±0.00 1.162±0.00 0.992±0.00 N/A 0.177±0.00 N/A N/A N/A
ENSMUST00000139323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00
ENSMUST00000152317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152376 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.06 N/A 0.102±0.00 N/A N/A N/A
ENSMUST00000154062 1.083±0.65 1.238±0.00 0.648±0.00 10.821±0.00 1.621±0.00 1.002±0.17 N/A 0.272±0.08 0.221±0.06 0.625±0.05 0.079±0.06 1.638±0.08 0.188±0.11 0.063±0.04

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