C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481690 GPCPD1-003 ENSG00000125772 9606 - 20:5575900-5610924 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000481690
Transcript ID Placenta Testis
ENST00000481690 3.812±0.00 14.539±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041F CIL_00041F_0001 CGP 20:5302040-5611026
CIL_00057F CIL_00057F_0001 CGP 20:5544439-5863912

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149854 Gpcpd1-003 nonsense_mediated_decay Mus_musculus 0 809
ENSMUST00000110142 Gpcpd1-201 protein_coding Mus_musculus 0 555
ENSMUST00000028822 Gpcpd1-006 protein_coding Mus_musculus 0 555
ENSMUST00000060955 Gpcpd1-001 protein_coding Mus_musculus 0 555
ENSMUST00000110136 Gpcpd1-004 protein_coding Mus_musculus 0 555
ENSMUST00000140867 Gpcpd1-009 processed_transcript Mus_musculus 0 335
ENSMUST00000145694 Gpcpd1-002 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000148833 Gpcpd1-005 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000124107 Gpcpd1-010 protein_coding Mus_musculus 0 259
ENSMUST00000110135 Gpcpd1-011 protein_coding Mus_musculus 0 257
ENSMUST00000131617 Gpcpd1-008 processed_transcript Mus_musculus 3e-17 94

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