C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484616 RPS12-002 ENSG00000112306 9606 + 6:132814569-132817564 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryENST00000484616
Transcript ID Bladder Liver Muscle Ovary
ENST00000484616 8.005±0.00 15.107±0.00 11.953±0.00 43.421±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014O CIL_00014O_0002 CGP 6:132814441-133532120

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000168843 Gm4925-002 processed_transcript Mus_musculus 0 309
ENSMUST00000092231 Gm4925-001 transcribed_processed_pseudogene Mus_musculus 0 300
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 285
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 285
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 200

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