C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35 (GDP-fucose transporter), member C2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487729 SLC35C2-010 ENSG00000080189 9606 - 20:46350771-46357701 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungMusclePlacentaTestisENST00000487729
Transcript ID Heart Lung Muscle Placenta Testis
ENST00000487729 5.220±0.00 8.898±0.00 3.995±0.00 15.191±0.00 12.752±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BF CIL_0007BF_0001 CGP 20:46173733-46364458
CIL_0006G4 CIL_0006G4_0001 CGP 20:46345980-46432985

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109298 Slc35c2-014 protein_coding Mus_musculus 0 688
ENSMUST00000109299 Slc35c2-013 protein_coding Mus_musculus 0 688
ENSMUST00000109300 Slc35c2-012 protein_coding Mus_musculus 0 688
ENSMUST00000017808 Slc35c2-008 protein_coding Mus_musculus 0 688
ENSMUST00000154608 Slc35c2-007 retained_intron Mus_musculus 0 688
ENSMUST00000132270 Slc35c2-004 nonsense_mediated_decay Mus_musculus 0 688
ENSMUST00000129336 Slc35c2-005 protein_coding Mus_musculus 0 335
ENSMUST00000145301 Slc35c2-006 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000155289 Slc35c2-003 protein_coding Mus_musculus 0 248
ENSMUST00000125550 Slc35c2-015 retained_intron Mus_musculus 5e-35 152

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