C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489516 BCL11A-007 ENSG00000119866 9606 - 2:60451781-60550914 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartOvaryPlacentaENST00000489516
Transcript ID Brain Colon Heart Ovary Placenta
ENST00000489516 1.305±0.00 1.640±0.00 1.118±0.00 0.169±0.00 0.059±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0001 UCNEbase 2:57740887-60568309
CIL_0008BH CIL_0008BH_0001 VISTA 2:59914360-60515380
CIL_000881 CIL_000881_0001 VISTA 2:59970922-60574878
CIL_0008WW CIL_0008WW_0001 VISTA 2:59988962-60590957
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118955 Bcl11a-001 protein_coding Mus_musculus 0 1881
ENSMUST00000109516 Bcl11a-005 protein_coding Mus_musculus 0 1810
ENSMUST00000109514 Bcl11a-006 protein_coding Mus_musculus 0 963
ENSMUST00000000881 Bcl11a-003 protein_coding Mus_musculus 0 963
ENSMUST00000124148 Bcl11a-004 retained_intron Mus_musculus 0 542
ENSMUST00000127494 Bcl11a-002 processed_transcript Mus_musculus 0 427

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