C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Y box binding protein 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489612 YBX1P2-001 ENSG00000231167 9606 - 7:105582258-105583256 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000489612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000489612 0.364±0.00 0.375±0.00 0.369±0.00 0.298±0.00 0.308±0.00 0.510±0.00 0.301±0.00 0.084±0.04 0.073±0.00 0.261±0.00 0.840±0.00 0.061±0.02 0.125±0.07 1.652±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079644 Ybx1-001 protein_coding Mus_musculus 0 1319
ENSMUST00000117567 Gm11560-001 processed_pseudogene Mus_musculus 0 1194
ENSMUST00000127737 Ybx1-004 protein_coding Mus_musculus 0 850
ENSMUST00000123576 E130201H02Rik-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000119046 Gm15808-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000145976 Ybx1-007 processed_transcript Mus_musculus 0 326
ENSMUST00000142884 Ybx1-005 processed_transcript Mus_musculus 0 307
ENSMUST00000139897 Ybx1-003 processed_transcript Mus_musculus 0 307
ENSMUST00000144992 Ybx1-006 processed_transcript Mus_musculus 1.4013e-45 187

Loading