C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36a pseudogene 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490372 RPL36AP21-001 ENSG00000240785 9606 + 5:18049550-18049872 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungMuscleOvaryTestisENST00000490372
Transcript ID Adrenal Breast Colon Lung Muscle Ovary Testis
ENST00000490372 0.048±0.00 0.098±0.00 0.090±0.00 0.098±0.00 0.131±0.00 0.305±0.17 0.164±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054544 Rpl36al-001 protein_coding Mus_musculus 0 424
ENSMUST00000110619 Rpl36al-002 protein_coding Mus_musculus 0 424
ENSMUST00000110620 Rpl36al-003 protein_coding Mus_musculus 0 424
ENSMUST00000120093 Rpl36a-ps3-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 351
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 348
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 344
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 340
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 0 335
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 0 311
ENSDART00000080919 rpl36a-001 protein_coding Danio_rerio 0 263
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 0 189

Loading