C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490872 SLC11A1-019 ENSG00000018280 9606 + 2:218389965-218391771 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000490872
Transcript ID Colon Liver
ENST00000490872 1.384±0.00 0.760±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054V CIL_00054V_0001 CGP 2:218356856-218396894
CIL_0005VF CIL_0005VF_0001 CGP 2:218382029-218405941

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147233 Slc11a1-002 retained_intron Mus_musculus 0 289
ENSMUST00000133896 Slc11a1-007 retained_intron Mus_musculus 0 287
ENSMUST00000027368 Slc11a1-001 protein_coding Mus_musculus 0 287
ENSMUST00000187516 Slc11a1-011 protein_coding Mus_musculus 0 287
ENSMUST00000127487 Slc11a1-008 retained_intron Mus_musculus 0 220
ENSMUST00000149166 Slc11a1-009 processed_transcript Mus_musculus 0 217

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