C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin A, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490936 FLNA-003 ENSG00000196924 9606 - X:154348648-154359638 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryTestisENST00000490936
Transcript ID Lung Ovary Testis
ENST00000490936 75.579±0.00 83.790±0.00 11.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L8 CIL_0001L8_0001 CGP X:154295671-154374638
CIL_0001L9 CIL_0001L9_0001 CGP X:154348524-154381523

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101454 Flna-201 protein_coding Mus_musculus 0 3542
ENSMUST00000114299 Flna-002 protein_coding Mus_musculus 0 3542
ENSMUST00000033699 Flna-003 protein_coding Mus_musculus 0 3437
ENSMUST00000144429 Flna-001 nonsense_mediated_decay Mus_musculus 0 3437
ENSMUST00000130007 Flna-013 protein_coding Mus_musculus 0 2036
ENSMUST00000124950 Flna-006 retained_intron Mus_musculus 0 826
ENSMUST00000090474 Flnc-201 protein_coding Mus_musculus 0 726
ENSMUST00000065090 Flnc-002 protein_coding Mus_musculus 0 726
ENSMUST00000150554 Flna-015 protein_coding Mus_musculus 0 651
ENSMUST00000156766 Flna-016 processed_transcript Mus_musculus 0 617
ENSMUST00000127463 Flna-014 protein_coding Mus_musculus 0 601
ENSMUST00000141528 Flna-011 retained_intron Mus_musculus 0 590
ENSMUST00000133609 Flna-010 retained_intron Mus_musculus 0 477
ENSMUST00000101617 Flnc-001 protein_coding Mus_musculus 0 418
ENSDART00000073442 flna-201 protein_coding Danio_rerio 0 399
ENSDART00000135820 flna-001 protein_coding Danio_rerio 0 399
ENSDART00000026492 flncb-201 protein_coding Danio_rerio 0 267
ENSDART00000134286 flncb-001 protein_coding Danio_rerio 0 267

Loading