C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101454 Flna-201 ENSMUSG00000031328 10090 - X:74223463-74246534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000101454
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000101454 48.271±3.61 8.954±0.00 13.949±9.61 22.215±0.00 5.712±0.00 6.395±1.45 6.830±4.85 3.070±1.08 68.619±26.45 21.685±10.16 1.085±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L8 CIL_0001L8_0002 CGP X:74177259-74249820
CIL_0001L9 CIL_0001L9_0002 CGP X:74223461-74261548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001837 IGI epithelial to mesenchymal transition
GO:0003779 TAS actin binding
GO:0005080 IDA protein kinase C binding
GO:0005515 IPI protein binding
GO:0005802 IDA trans-Golgi network
GO:0030036 IGI actin cytoskeleton organization
GO:0031523 ISO Myb complex
GO:0045022 IDA early endosome to late endosome transport
GO:0051015 IEA actin filament binding
GO:0090307 ISO spindle assembly involved in mitosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295956 FLNB-001 protein_coding Homo_sapiens 0 804
ENST00000325888 FLNC-001 protein_coding Homo_sapiens 0 1563
ENST00000344736 FLNA-010 protein_coding Homo_sapiens 0 5928
ENST00000346177 FLNC-002 protein_coding Homo_sapiens 0 1563
ENST00000358537 FLNB-003 protein_coding Homo_sapiens 0 804
ENST00000360319 FLNA-001 protein_coding Homo_sapiens 0 9134
ENST00000369850 FLNA-002 protein_coding Homo_sapiens 0 9073
ENST00000369856 FLNA-022 protein_coding Homo_sapiens 0 8973
ENST00000420627 FLNA-021 nonsense_mediated_decay Homo_sapiens 0 8955
ENST00000422373 FLNA-201 protein_coding Homo_sapiens 0 9178
ENST00000429972 FLNB-005 protein_coding Homo_sapiens 0 804
ENST00000438732 FLNA-015 protein_coding Homo_sapiens 0 601
ENST00000444578 FLNA-016 protein_coding Homo_sapiens 0 665
ENST00000462590 FLNA-009 retained_intron Homo_sapiens 0 608
ENST00000466319 FLNA-005 processed_transcript Homo_sapiens 0 418
ENST00000474072 FLNA-006 retained_intron Homo_sapiens 0 318
ENST00000474358 FLNA-007 retained_intron Homo_sapiens 0 664
ENST00000490882 FLNB-002 protein_coding Homo_sapiens 0 804
ENST00000490936 FLNA-003 retained_intron Homo_sapiens 0 3542
ENST00000498411 FLNA-017 processed_transcript Homo_sapiens 1e-28 130
ENST00000498491 FLNA-008 processed_transcript Homo_sapiens 0 1029
ENST00000610817 FLNA-202 protein_coding Homo_sapiens 0 6643

Loading