C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495623 RP11-627K11.1-001 ENSG00000243517 9606 - 12:31251992-31252597 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000495623
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000495623 1.152±0.00 2.299±0.00 0.238±0.00 0.917±0.00 2.223±0.00 0.531±0.00 1.017±0.00 0.982±0.00 1.961±0.00 1.760±0.00 0.363±0.29 0.917±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150350 Rpl13a-001 protein_coding Mus_musculus 0 676
ENSMUST00000124300 Rpl13a-011 protein_coding Mus_musculus 0 665
ENSMUST00000102669 Rpl13a-009 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000125074 Rpl13a-006 processed_transcript Mus_musculus 0 606
ENSMUST00000142239 Rpl13a-010 processed_transcript Mus_musculus 0 348
ENSMUST00000131697 Rpl13a-005 retained_intron Mus_musculus 0 294
ENSMUST00000141807 Rpl13a-002 processed_transcript Mus_musculus 0 291
ENSMUST00000138887 Rpl13a-007 retained_intron Mus_musculus 2.00386e-43 180

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