C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L13A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142239 Rpl13a-010 ENSMUSG00000074129 10090 - 7:45125560-45128735 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000142239
Transcript ID Ovary
ENSMUST00000142239 247.678±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391857 RPL13A-001 protein_coding Homo_sapiens 0 414
ENST00000430133 RPL13AP6-001 processed_pseudogene Homo_sapiens 0 342
ENST00000439189 RPL13AP5-001 processed_pseudogene Homo_sapiens 0 381
ENST00000467825 RPL13A-009 protein_coding Homo_sapiens 0 329
ENST00000472481 RPL13A-007 retained_intron Homo_sapiens 0 414
ENST00000476268 RPL13A-003 retained_intron Homo_sapiens 1e-23 115
ENST00000477613 RPL13A-008 processed_transcript Homo_sapiens 0 294
ENST00000478813 RP11-941H19.1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000479992 RPL13A-006 retained_intron Homo_sapiens 0 231
ENST00000484279 RPL13A-004 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000486930 RPL13A-005 retained_intron Homo_sapiens 0 294
ENST00000487479 RPL13AP3-001 transcribed_processed_pseudogene Homo_sapiens 0 220
ENST00000488946 RPL13A-002 retained_intron Homo_sapiens 2e-23 115
ENST00000494676 RPL13AP3-002 processed_transcript Homo_sapiens 0 270
ENST00000495623 RP11-627K11.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000534211 RP11-140L24.3-001 processed_pseudogene Homo_sapiens 2e-22 110
ENST00000624069 RPL13A-013 nonsense_mediated_decay Homo_sapiens 0 355

Loading