C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L13A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141807 Rpl13a-002 ENSMUSG00000074129 10090 - 7:45126478-45128736 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000141807
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000141807 620.818±229.98 1245.876±435.31 945.483±13.12 458.362±54.67 299.407±69.06 295.969±37.42 313.857±75.08 675.685±615.29 564.796±312.21 874.110±482.23 267.055±48.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391857 RPL13A-001 protein_coding Homo_sapiens 0 364
ENST00000430133 RPL13AP6-001 processed_pseudogene Homo_sapiens 0 289
ENST00000439189 RPL13AP5-001 processed_pseudogene Homo_sapiens 0 324
ENST00000467825 RPL13A-009 protein_coding Homo_sapiens 0 327
ENST00000472481 RPL13A-007 retained_intron Homo_sapiens 0 364
ENST00000476268 RPL13A-003 retained_intron Homo_sapiens 1e-23 115
ENST00000477613 RPL13A-008 processed_transcript Homo_sapiens 0 243
ENST00000479992 RPL13A-006 retained_intron Homo_sapiens 0 231
ENST00000484279 RPL13A-004 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000486930 RPL13A-005 retained_intron Homo_sapiens 0 243
ENST00000488946 RPL13A-002 retained_intron Homo_sapiens 2e-23 115
ENST00000495623 RP11-627K11.1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000624069 RPL13A-013 nonsense_mediated_decay Homo_sapiens 0 305

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