C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large, P0 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496593 RPLP0P2-002 ENSG00000243742 9606 + 11:61615036-61639449 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000496593
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000496593 0.311±0.00 0.729±0.00 0.294±0.00 0.212±0.20 0.386±0.00 0.085±0.07 0.398±0.00 0.098±0.00 0.884±0.00 0.387±0.00 0.068±0.06 0.076±0.00 0.324±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086519 Rplp0-001 protein_coding Mus_musculus 0 1214
ENSMUST00000076373 Gm8730-201 protein_coding Mus_musculus 0 1192
ENSMUST00000121456 Gm14165-001 processed_pseudogene Mus_musculus 0 1051
ENSMUST00000122125 Rplp0-ps1-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000156359 Rplp0-004 protein_coding Mus_musculus 0 861
ENSMUST00000145890 Gucd1-002 nonsense_mediated_decay Mus_musculus 0 817
ENSMUST00000152976 Rplp0-002 protein_coding Mus_musculus 0 588
ENSMUST00000155584 Rplp0-003 retained_intron Mus_musculus 0 466
ENSMUST00000121323 Gm8199-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000005 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00006 55

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