C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121456 Gm14165-001 ENSMUSG00000081434 10090 + 2:152353615-152354566 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000121456
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000121456 3.425±1.67 1.174±0.35 0.037±0.00 0.068±0.03 3.907±1.07 3.374±3.65 1.068±0.71 2.012±0.35 0.699±0.75 2.616±0.50 4.011±2.47 0.203±0.17 1.141±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228306 RPLP0-201 protein_coding Homo_sapiens 0 1212
ENST00000313104 RPLP0-003 protein_coding Homo_sapiens 0 643
ENST00000392514 RPLP0-001 protein_coding Homo_sapiens 0 1212
ENST00000394878 RPLP0P6-001 processed_pseudogene Homo_sapiens 0 1173
ENST00000445179 RP1-140J1.4-001 processed_pseudogene Homo_sapiens 0 785
ENST00000448115 RP11-302I18.1-001 processed_pseudogene Homo_sapiens 0 889
ENST00000461635 RP11-436J20.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000471253 RP11-133K1.1-001 processed_pseudogene Homo_sapiens 0 922
ENST00000490750 RPLP0P2-001 transcribed_processed_pseudogene Homo_sapiens 0 1051
ENST00000496593 RPLP0P2-002 processed_transcript Homo_sapiens 0 1051
ENST00000546564 RPLP0-022 retained_intron Homo_sapiens 0 645
ENST00000546989 RPLP0-008 protein_coding Homo_sapiens 0 641
ENST00000546990 RPLP0-025 protein_coding Homo_sapiens 0 499
ENST00000547173 RPLP0-026 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000547191 RPLP0-014 protein_coding Homo_sapiens 0 603
ENST00000547211 RPLP0-019 protein_coding Homo_sapiens 0 846
ENST00000547475 RPLP0-027 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000548495 RPLP0-012 retained_intron Homo_sapiens 0 296
ENST00000548551 RPLP0-011 retained_intron Homo_sapiens 0 405
ENST00000548568 RPLP0-016 retained_intron Homo_sapiens 0 457
ENST00000549098 RPLP0-013 nonsense_mediated_decay Homo_sapiens 0 1160
ENST00000549242 RPLP0-010 retained_intron Homo_sapiens 0 342
ENST00000550296 RPLP0-020 processed_transcript Homo_sapiens 0 641
ENST00000550423 RPLP0-015 protein_coding Homo_sapiens 0 435
ENST00000550856 RPLP0-009 protein_coding Homo_sapiens 0 950
ENST00000551150 RPLP0-002 protein_coding Homo_sapiens 0 1212
ENST00000551258 RPLP0-024 nonsense_mediated_decay Homo_sapiens 0 1050
ENST00000551783 RPLP0-018 retained_intron Homo_sapiens 0 342
ENST00000551914 RPLP0-021 protein_coding Homo_sapiens 0 473
ENST00000552292 RPLP0-006 protein_coding Homo_sapiens 0 348
ENST00000552461 RPLP0-004 retained_intron Homo_sapiens 0 1123
ENST00000552902 RPLP0-023 retained_intron Homo_sapiens 0 645
ENST00000588088 RP11-824M15.3-002 processed_transcript Homo_sapiens 0 442
ENST00000592549 RP11-824M15.3-001 transcribed_processed_pseudogene Homo_sapiens 0 904

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