C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large, P0
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155584 Rplp0-003 ENSMUSG00000067274 10090 + 5:115559623-115561074 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228306 RPLP0-201 protein_coding Homo_sapiens 0 571
ENST00000313104 RPLP0-003 protein_coding Homo_sapiens 0 556
ENST00000392514 RPLP0-001 protein_coding Homo_sapiens 0 556
ENST00000394878 RPLP0P6-001 processed_pseudogene Homo_sapiens 0 464
ENST00000448115 RP11-302I18.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000459899 RP11-561B11.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000471253 RP11-133K1.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000490750 RPLP0P2-001 transcribed_processed_pseudogene Homo_sapiens 0 398
ENST00000496593 RPLP0P2-002 processed_transcript Homo_sapiens 0 466
ENST00000498296 RPLP0P11-001 processed_pseudogene Homo_sapiens 0 263
ENST00000546564 RPLP0-022 retained_intron Homo_sapiens 0 571
ENST00000546989 RPLP0-008 protein_coding Homo_sapiens 0 556
ENST00000546990 RPLP0-025 protein_coding Homo_sapiens 0 520
ENST00000547173 RPLP0-026 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000547191 RPLP0-014 protein_coding Homo_sapiens 0 375
ENST00000547211 RPLP0-019 protein_coding Homo_sapiens 0 287
ENST00000547475 RPLP0-027 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000548495 RPLP0-012 retained_intron Homo_sapiens 0 383
ENST00000548551 RPLP0-011 retained_intron Homo_sapiens 0 516
ENST00000548568 RPLP0-016 retained_intron Homo_sapiens 0 566
ENST00000549098 RPLP0-013 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000549242 RPLP0-010 retained_intron Homo_sapiens 0 435
ENST00000550296 RPLP0-020 processed_transcript Homo_sapiens 0 542
ENST00000550423 RPLP0-015 protein_coding Homo_sapiens 0 375
ENST00000550856 RPLP0-009 protein_coding Homo_sapiens 0 571
ENST00000551150 RPLP0-002 protein_coding Homo_sapiens 0 571
ENST00000551258 RPLP0-024 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000551336 RPLP0-017 processed_transcript Homo_sapiens 0 196
ENST00000551783 RPLP0-018 retained_intron Homo_sapiens 0 449
ENST00000551914 RPLP0-021 protein_coding Homo_sapiens 0 529
ENST00000552461 RPLP0-004 retained_intron Homo_sapiens 0 375
ENST00000552902 RPLP0-023 retained_intron Homo_sapiens 0 571
ENST00000572768 RP11-429H5.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000588088 RP11-824M15.3-002 processed_transcript Homo_sapiens 0 455
ENST00000592549 RP11-824M15.3-001 transcribed_processed_pseudogene Homo_sapiens 0 390

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