C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large, P0, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122125 Rplp0-ps1-001 ENSMUSG00000081640 10090 + 3:93278141-93279073 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122125 0.585±0.34 0.185±0.16 0.114±0.00 0.120±0.07 0.973±1.02 0.704±0.30 0.269±0.03 0.639±0.29 0.082±0.07 0.161±0.08 0.061±0.00 0.592±0.26 0.080±0.06 0.141±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228306 RPLP0-201 protein_coding Homo_sapiens 0 1064
ENST00000313104 RPLP0-003 protein_coding Homo_sapiens 0 634
ENST00000392514 RPLP0-001 protein_coding Homo_sapiens 0 1064
ENST00000394878 RPLP0P6-001 processed_pseudogene Homo_sapiens 0 1031
ENST00000445179 RP1-140J1.4-001 processed_pseudogene Homo_sapiens 0 701
ENST00000448115 RP11-302I18.1-001 processed_pseudogene Homo_sapiens 0 806
ENST00000459899 RP11-561B11.1-001 processed_pseudogene Homo_sapiens 0 813
ENST00000461635 RP11-436J20.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000471253 RP11-133K1.1-001 processed_pseudogene Homo_sapiens 0 808
ENST00000490750 RPLP0P2-001 transcribed_processed_pseudogene Homo_sapiens 0 870
ENST00000496593 RPLP0P2-002 processed_transcript Homo_sapiens 0 870
ENST00000546564 RPLP0-022 retained_intron Homo_sapiens 0 636
ENST00000546989 RPLP0-008 protein_coding Homo_sapiens 0 632
ENST00000546990 RPLP0-025 protein_coding Homo_sapiens 0 455
ENST00000547173 RPLP0-026 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000547191 RPLP0-014 protein_coding Homo_sapiens 0 593
ENST00000547211 RPLP0-019 protein_coding Homo_sapiens 0 832
ENST00000547475 RPLP0-027 nonsense_mediated_decay Homo_sapiens 0 586
ENST00000548495 RPLP0-012 retained_intron Homo_sapiens 0 291
ENST00000548551 RPLP0-011 retained_intron Homo_sapiens 0 407
ENST00000548568 RPLP0-016 retained_intron Homo_sapiens 0 459
ENST00000549098 RPLP0-013 nonsense_mediated_decay Homo_sapiens 0 1014
ENST00000549242 RPLP0-010 retained_intron Homo_sapiens 0 342
ENST00000550296 RPLP0-020 processed_transcript Homo_sapiens 0 632
ENST00000550423 RPLP0-015 protein_coding Homo_sapiens 0 431
ENST00000550856 RPLP0-009 protein_coding Homo_sapiens 0 935
ENST00000551150 RPLP0-002 protein_coding Homo_sapiens 0 1064
ENST00000551258 RPLP0-024 nonsense_mediated_decay Homo_sapiens 0 950
ENST00000551336 RPLP0-017 processed_transcript Homo_sapiens 4e-18 95
ENST00000551783 RPLP0-018 retained_intron Homo_sapiens 0 342
ENST00000551914 RPLP0-021 protein_coding Homo_sapiens 0 475
ENST00000552292 RPLP0-006 protein_coding Homo_sapiens 0 198
ENST00000552461 RPLP0-004 retained_intron Homo_sapiens 0 970
ENST00000552902 RPLP0-023 retained_intron Homo_sapiens 0 636
ENST00000588088 RP11-824M15.3-002 processed_transcript Homo_sapiens 0 422
ENST00000592549 RP11-824M15.3-001 transcribed_processed_pseudogene Homo_sapiens 0 784

Loading