C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496620 HNRNPA1P17-001 ENSG00000243188 9606 - 3:108325520-108326814 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungTestisENST00000496620
Transcript ID Bladder Lung Testis
ENST00000496620 0.092±0.00 0.321±0.00 0.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 773
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 625
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 614
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 542
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 542
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 235

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