C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36a pseudogene 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497944 RPL36AP45-001 ENSG00000240366 9606 - 15:75186651-75186968 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMusclePlacentaTestisENST00000497944
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Placenta Testis
ENST00000497944 0.193±0.00 0.104±0.00 0.211±0.00 0.053±0.00 0.049±0.00 0.327±0.14 0.266±0.00 0.094±0.00 0.373±0.00 0.098±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054544 Rpl36al-001 protein_coding Mus_musculus 0 396
ENSMUST00000110619 Rpl36al-002 protein_coding Mus_musculus 0 396
ENSMUST00000110620 Rpl36al-003 protein_coding Mus_musculus 0 396
ENSMUST00000120093 Rpl36a-ps3-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 307
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 303
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 0 302
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 298
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 0 272
ENSDART00000080919 rpl36a-001 protein_coding Danio_rerio 0 219
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 1.96182e-44 182
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 9.99967e-42 172

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