C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spermatogenesis associated 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505320 SPATA18-004 ENSG00000163071 9606 + 4:52051461-52094887 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000505320
Transcript ID Testis
ENST00000505320 30.173±11.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CP CIL_0001CP_0001 CGP 4:52020706-52097292
CIL_0001CQ CIL_0001CQ_0001 CGP 4:52051331-52659335

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005741 IEA mitochondrial outer membrane
GO:0033554 IEA cellular response to stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041422 Spata18-201 protein_coding Mus_musculus 0 669
ENSMUST00000178631 Spata18-204 protein_coding Mus_musculus 0 669
ENSMUST00000071077 Spata18-202 protein_coding Mus_musculus 0 669
ENSMUST00000113548 Spata18-203 protein_coding Mus_musculus 0 656

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