C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505751 RPS4XP20-001 ENSG00000249987 9606 - 19:34022656-34023427 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryENST00000505751
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary
ENST00000505751 0.068±0.00 0.035±0.00 0.018±0.00 0.035±0.00 0.098±0.00 0.052±0.00 0.015±0.00 0.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 726
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 652
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 652
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 466
ENSDART00000128917 rps4x-001 protein_coding Danio_rerio 0 446
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 375
ENSMUST00000119465 Gm12757-001 processed_pseudogene Mus_musculus 0 313
ENSDART00000007957 rps4x-003 retained_intron Danio_rerio 0 259
ENSMUST00000152739 Rps4x-002 retained_intron Mus_musculus 3e-32 143

Loading