C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COP9 signalosome subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506443 COPS4-006 ENSG00000138663 9606 + 4:83035199-83057062 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungENST00000506443
Transcript ID Bladder Breast Kidney Liver Lung
ENST00000506443 2.698±0.00 4.243±0.00 3.988±0.00 7.284±0.00 5.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052W CIL_00052W_0002 CGP 4:82909973-83075818
CIL_00052V CIL_00052V_0002 CGP 4:83034447-83137075

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045993 Cops4-001 protein_coding Mus_musculus 0 704
ENSMUST00000147729 Cops4-002 retained_intron Mus_musculus 0 571
ENSMUST00000146476 Cops4-005 protein_coding Mus_musculus 0 568
ENSMUST00000123069 Cops4-004 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000151414 Cops4-006 protein_coding Mus_musculus 0 457
ENSMUST00000123492 Cops4-007 nonsense_mediated_decay Mus_musculus 0 357

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