C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox homolog 3 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508108 CBX3P3-001 ENSG00000250045 9606 - 5:112777630-112778161 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLungOvaryPlacentaENST00000508108
Transcript ID Colon Heart Kidney Lung Ovary Placenta
ENST00000508108 0.340±0.00 0.080±0.06 1.098±0.00 0.478±0.00 0.044±0.00 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KL CIL_0005KL_0002 CGP 5:112142441-112846239

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 0 521
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 0 521
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 0 521
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000091531 Gm5196-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000091539 Gm6917-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000190083 RP23-231B19.1-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000141711 Cbx3-007 protein_coding Mus_musculus 0 331
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 0 303

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