C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO2 pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508743 SUMO2P17-002 ENSG00000248278 9606 - 17:48874860-48908983 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverOvaryPlacentaTestisENST00000508743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Ovary Placenta Testis
ENST00000508743 0.234±0.00 0.201±0.00 0.091±0.00 0.218±0.10 0.136±0.00 0.106±0.03 0.082±0.00 0.063±0.01 0.047±0.00 0.484±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153892 Sumo2-001 protein_coding Mus_musculus 0 226
ENSMUST00000117589 Sumo2-004 protein_coding Mus_musculus 0 226
ENSMUST00000121185 Sumo2-003 protein_coding Mus_musculus 0 226
ENSMUST00000021084 Sumo2-002 nonsense_mediated_decay Mus_musculus 0 224
ENSMUST00000119738 Gm12335-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000121569 Smt3h2-ps4-001 processed_pseudogene Mus_musculus 4.2039e-45 185
ENSMUST00000117664 Gm10241-001 processed_pseudogene Mus_musculus 4.2039e-45 185
ENSMUST00000118989 Gm13690-001 processed_pseudogene Mus_musculus 1.96182e-44 183
ENSMUST00000121366 Gm13430-001 processed_pseudogene Mus_musculus 2.00386e-43 180

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