C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119738 Gm12335-001 ENSMUSG00000085738 10090 - 11:75066436-75066762 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119738 0.705±0.24 0.654±0.07 0.776±0.18 0.830±0.08 0.709±0.37 1.131±0.68 0.438±0.22 1.174±0.75 0.445±0.21 0.538±0.19 0.812±0.46 0.605±0.43 0.396±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RP CIL_0007RP_0002 VISTA 11:74746156-75348336
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435
CIL_0007KQ CIL_0007KQ_0002 UCNEbase 11:75016990-75215448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 250
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 401
ENST00000405924 SUMO2P12-001 processed_pseudogene Homo_sapiens 8.99999e-40 165
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000415468 AC079809.2-001 processed_pseudogene Homo_sapiens 0 294
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 486
ENST00000427515 RP11-184I16.3-001 processed_pseudogene Homo_sapiens 0 265
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000428741 RP11-4K3__A.3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 339
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 390
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 327
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 381
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 390
ENST00000508743 SUMO2P17-002 processed_transcript Homo_sapiens 0 220
ENST00000511179 SUMO2P7-001 processed_pseudogene Homo_sapiens 0 333
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 340
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 440
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 460
ENST00000588843 RP11-49K24.5-001 processed_pseudogene Homo_sapiens 0 331

Loading